RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 TBC1D13Q9NVG8 400 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 KLK14Q9P0G3 267 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 CALCOCO1Q9P1Z2 691 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ARHGAP20Q9P2F6 1191 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 WDR35Q9P2L0 1181 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 HESX1Q9UBX0 185 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ADAMTS1Q9UHI8 967 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 CDH9Q9ULB4 789 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 STRIP2Q9ULQ0 834 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 MAFFQ9ULX9 164 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 INPP5FQ9Y2H2 1132 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 INSL6Q9Y581 213 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ADGRG1Q9Y653 693 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 SF3B1O75533 1304 aaKnown RBP eCLIP6.39□□□□□ -1.39
CHMP3-206ENST00000466032 CENPFP49454 3210 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ANK1P16157 1881 aa6.39□□□□□ -1.39
CHMP3-206ENST00000466032 ANKRD62A6NC57 917 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 OR6C75A6NL08 312 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 TBKBP1A7MCY6 615 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 A8MXQ7 604 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 PJA2O43164 708 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 CYP26A1O43174 497 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 THAP12O43422 761 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 LRRN2O75325 713 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 OAZ2O95190 189 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 POMCP01189 267 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 CALB1P05937 261 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 H2AFZP0C0S5 128 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 CDH5P33151 784 aaPredicted RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 MAGEA1P43355 309 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 ACADSBP45954 432 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 NSFP46459 744 aaKnown RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 OR1G1P47890 313 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 MMP16P51512 607 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 CLCNKBP51801 687 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 VAV2P52735 878 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 WDR5P61964 334 aaKnown RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 TSPY1Q01534 308 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 TAP1Q03518 808 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 ARID5AQ03989 594 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 KRT17Q04695 432 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 YWHAHQ04917 246 aaPredicted RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 SRSF11Q05519 484 aaKnown RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 TCEAL1Q15170 157 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 NFE2Q16621 373 aaPredicted RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 SOWAHAQ2M3V2 549 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 CLLU1OSQ5K130 101 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 LIN9Q5TKA1 542 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 ARHGAP17Q68EM7 881 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 SPOPLQ6IQ16 392 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 BRICD5Q6PL45 260 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 LCLAT1Q6UWP7 414 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 C4orf50Q6ZRC1 276 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 ANKS3Q6ZW76 656 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 H2AFVQ71UI9 128 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 KIAA1328Q86T90 577 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 ZDHHC17Q8IUH5 632 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 DCP1BQ8IZD4 617 aaKnown RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 ADGRF2Q8IZF7 708 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 OR6B3Q8NGW1 331 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 SLC30A5Q8TAD4 765 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 C2orf15Q8WU43 125 aaKnown RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 ZNF606Q8WXB4 792 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 CTNNBL1Q8WYA6 563 aaPredicted RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 DPF3Q92784 378 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 LPPQ93052 612 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 C18orf25Q96B23 403 aaPredicted RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 ZNF558Q96NG5 402 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 YME1L1Q96TA2 773 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 RAD9AQ99638 391 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 PLVAPQ9BX97 442 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 UBXN6Q9BZV1 441 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 ISCUQ9H1K1 167 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 KCNF1Q9H3M0 494 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 MRPL47Q9HD33 250 aaKnown RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 WDR70Q9NW82 654 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 MIOSQ9NXC5 875 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 HSFX1Q9UBD0 423 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 TUBGCP4Q9UGJ1 667 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 PUF60Q9UHX1 559 aaKnown RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 NAGPAQ9UK23 515 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 ADAM28Q9UKQ2 775 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 STXBP5LQ9Y2K9 1186 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 PPP2R2CQ9Y2T4 447 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 PCDHB12Q9Y5F1 795 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 SLC4A7Q9Y6M7 1214 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 SCINQ9Y6U3 715 aa6.38□□□□□ -1.39
CHMP3-206ENST00000466032 PDCD11Q14690 1871 aaKnown RBP6.38□□□□□ -1.39
CHMP3-206ENST00000466032 COL4A6Q14031 1691 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 CASTOR2A6NHX0 329 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 SOWAHDA6NJG2 315 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 ZBBXA8MT70 800 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 NRP1O14786 923 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 KIF5CO60282 957 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 GJB5O95377 273 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 CYP1A1P04798 512 aaPredicted RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 RB1P06400 928 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 WEE2P0C1S8 567 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 TMEM253P0C7T8 217 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms