RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 ESRP1Q6NXG1 681 aaKnown RBP9.9□□□□□ -0.82
SCAF11-205ENST00000465950 KDELC2Q7Z4H8 507 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 LINC00523Q86TU6 105 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 EGFL8Q99944 293 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 SLC2A4RGQ9NR83 387 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 KLK14Q9P0G3 267 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 KIAA1468Q9P260 1216 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 CASTOR2A6NHX0 329 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 NCAM1P13591 858 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 UBA1P22314 1058 aaKnown RBP9.9□□□□□ -0.82
SCAF11-205ENST00000465950 CES1P23141 567 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 DHPSP49366 369 aaPredicted RBP9.9□□□□□ -0.82
SCAF11-205ENST00000465950 SNRPD1P62314 119 aaKnown RBP9.9□□□□□ -0.82
SCAF11-205ENST00000465950 TP53BP2Q13625 1128 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 TSGA10IPQ3SY00 556 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 PRAMEF19Q5SWL8 479 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 C8orf74Q6P047 294 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 VSTM1Q6UX27 236 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 UNC93AQ86WB7 457 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 ZNF518BQ9C0D4 1074 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 DHX35Q9H5Z1 703 aaKnown RBP9.9□□□□□ -0.82
SCAF11-205ENST00000465950 COMMD8Q9NX08 183 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 DDX43Q9NXZ2 648 aaKnown RBP9.9□□□□□ -0.82
SCAF11-205ENST00000465950 TBX20Q9UMR3 447 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 PCDHA11Q9Y5I1 949 aa9.9□□□□□ -0.82
SCAF11-205ENST00000465950 TCP1P17987 556 aaKnown RBP9.9□□□□□ -0.83
SCAF11-205ENST00000465950 CD52P31358 61 aa9.9□□□□□ -0.83
SCAF11-205ENST00000465950 YWHAGP61981 247 aaKnown RBP eCLIP9.9□□□□□ -0.83
SCAF11-205ENST00000465950 FANCCQ00597 558 aa9.9□□□□□ -0.83
SCAF11-205ENST00000465950 MAP3K21Q5TCX8 1036 aa9.9□□□□□ -0.83
SCAF11-205ENST00000465950 BTNL9Q6UXG8 535 aa9.9□□□□□ -0.83
SCAF11-205ENST00000465950 ILDR2Q71H61 639 aa9.9□□□□□ -0.83
SCAF11-205ENST00000465950 NXPE3Q969Y0 559 aa9.9□□□□□ -0.83
SCAF11-205ENST00000465950 ALKBH8Q96BT7 664 aaKnown RBP9.9□□□□□ -0.83
SCAF11-205ENST00000465950 NAPGQ99747 312 aaPredicted RBP9.9□□□□□ -0.83
SCAF11-205ENST00000465950 BRD8Q9H0E9 1235 aa9.9□□□□□ -0.83
SCAF11-205ENST00000465950 FAM124BQ9H5Z6 455 aaPredicted RBP9.9□□□□□ -0.83
SCAF11-205ENST00000465950 RNF14Q9UBS8 474 aa9.9□□□□□ -0.83
SCAF11-205ENST00000465950 NFIBO00712 420 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 APOL1O14791 398 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 TDP2O95551 362 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 AKT2P31751 481 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 CCR1P32246 355 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 HLA-DQA1Q5Y7H0 255 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.89□□□□□ -0.83
SCAF11-205ENST00000465950 ARHGAP24Q8N264 748 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 HDAC7Q8WUI4 952 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 HEXDCQ8WVB3 486 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 ANKS1AQ92625 1134 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 WDCPQ9H6R7 721 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 NDRG2Q9UN36 371 aaKnown RBP9.89□□□□□ -0.83
SCAF11-205ENST00000465950 MEIS2O14770 477 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 CYP3A4P08684 503 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 CXCR2P25025 360 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 GCLMP48507 274 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 TBX4P57082 545 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 SP2Q02086 613 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 SNRNP35Q16560 246 aaKnown RBP9.89□□□□□ -0.83
SCAF11-205ENST00000465950 C11orf57Q6ZUT1 292 aaPredicted RBP9.89□□□□□ -0.83
SCAF11-205ENST00000465950 CHMP1BQ7LBR1 199 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 PDIK1LQ8N165 341 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 STK33Q9BYT3 514 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 RIOX1Q9H6W3 641 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 GDPD2Q9HCC8 539 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 SALL3Q9BXA9 1300 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 STX7O15400 261 aaKnown RBP9.89□□□□□ -0.83
SCAF11-205ENST00000465950 HDAC4P56524 1084 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 BST2Q10589 180 aaKnown RBP9.89□□□□□ -0.83
SCAF11-205ENST00000465950 EDRF1Q3B7T1 1238 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 TRIM60Q495X7 471 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 DGKKQ5KSL6 1271 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 TTC39BQ5VTQ0 682 aaPredicted RBP9.89□□□□□ -0.83
SCAF11-205ENST00000465950 TMC2Q8TDI7 906 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 DNAJC1Q96KC8 554 aaKnown RBP9.89□□□□□ -0.83
SCAF11-205ENST00000465950 SRGAP2O75044 1071 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 CFIP05156 583 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 NOS2P35228 1153 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 CCR3P51677 355 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 RWDD2BP57060 319 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 GJA9P57773 515 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 CACNB1Q02641 598 aaPredicted RBP9.89□□□□□ -0.83
SCAF11-205ENST00000465950 MESDQ14696 234 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 DENND2CQ68D51 928 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 KREMEN2Q8NCW0 462 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 PSD3Q9NYI0 1048 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 USH1CQ9Y6N9 552 aa9.89□□□□□ -0.83
SCAF11-205ENST00000465950 SMAPO00193 183 aa9.88□□□□□ -0.83
SCAF11-205ENST00000465950 NDUFS3O75489 264 aa9.88□□□□□ -0.83
SCAF11-205ENST00000465950 ITGB3P05106 788 aa9.88□□□□□ -0.83
SCAF11-205ENST00000465950 GUCA1AP43080 201 aaPredicted RBP9.88□□□□□ -0.83
SCAF11-205ENST00000465950 GEMP55040 296 aa9.88□□□□□ -0.83
SCAF11-205ENST00000465950 PIGHQ14442 188 aaPredicted RBP9.88□□□□□ -0.83
SCAF11-205ENST00000465950 GOLGA7BQ2TAP0 167 aa9.88□□□□□ -0.83
SCAF11-205ENST00000465950 DENND5BQ6ZUT9 1274 aa9.88□□□□□ -0.83
SCAF11-205ENST00000465950 JAMLQ86YT9 394 aa9.88□□□□□ -0.83
SCAF11-205ENST00000465950 EFCAB3Q8N7B9 438 aa9.88□□□□□ -0.83
SCAF11-205ENST00000465950 LRRC37BQ96QE4 947 aa9.88□□□□□ -0.83
SCAF11-205ENST00000465950 TARS2Q9BW92 718 aaKnown RBP9.88□□□□□ -0.83
SCAF11-205ENST00000465950 SUDS3Q9H7L9 328 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms