RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TASP1Q9H6P5 420 aa23.3■■□□□ 1.32
LIME1-203ENST00000465591 LTB4R2Q9NPC1 389 aa23.3■■□□□ 1.32
LIME1-203ENST00000465591 MAGED2Q9UNF1 606 aaPredicted RBP23.3■■□□□ 1.32
LIME1-203ENST00000465591 KIF26AQ9ULI4 1882 aaPredicted RBP23.3■■□□□ 1.32
LIME1-203ENST00000465591 PATJQ8NI35 1801 aa23.29■■□□□ 1.32
LIME1-203ENST00000465591 TACC1O75410 805 aa23.29■■□□□ 1.32
LIME1-203ENST00000465591 TADA3O75528 432 aa23.29■■□□□ 1.32
LIME1-203ENST00000465591 TARSP26639 723 aaKnown RBP23.29■■□□□ 1.32
LIME1-203ENST00000465591 BIRC3Q13489 604 aa23.29■■□□□ 1.32
LIME1-203ENST00000465591 PNOCQ13519 176 aa23.29■■□□□ 1.32
LIME1-203ENST00000465591 UBXN2BQ14CS0 331 aa23.29■■□□□ 1.32
LIME1-203ENST00000465591 ARHGAP15Q53QZ3 475 aa23.29■■□□□ 1.32
LIME1-203ENST00000465591 CEP135Q66GS9 1140 aa23.29■■□□□ 1.32
LIME1-203ENST00000465591 SMYD4Q8IYR2 804 aaPredicted RBP23.29■■□□□ 1.32
LIME1-203ENST00000465591 ENGASEQ8NFI3 743 aa23.29■■□□□ 1.32
LIME1-203ENST00000465591 DPEP3Q9H4B8 488 aa23.29■■□□□ 1.32
LIME1-203ENST00000465591 NXF1Q9UBU9 619 aaKnown RBP23.29■■□□□ 1.32
LIME1-203ENST00000465591 MYO15AQ9UKN7 3530 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 FAM170BA6NMN3 283 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 SLC38A8A6NNN8 435 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 PHACTR2O75167 634 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 NOL4O94818 638 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 CSH1P0DML2 217 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 CSH2P0DML3 217 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 GNL1P36915 607 aaPredicted RBP23.28■■□□□ 1.32
LIME1-203ENST00000465591 RPL10AP62906 217 aaKnown RBP23.28■■□□□ 1.32
LIME1-203ENST00000465591 TNNC1P63316 161 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 FCHO2Q0JRZ9 810 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 SCN4BQ8IWT1 228 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 GUF1Q8N442 669 aaKnown RBP23.28■■□□□ 1.32
LIME1-203ENST00000465591 IRF7Q92985 503 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 CCDC47Q96A33 483 aaKnown RBP23.28■■□□□ 1.32
LIME1-203ENST00000465591 PCED1BQ96HM7 432 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 FUBP3Q96I24 572 aaKnown RBP eCLIP23.28■■□□□ 1.32
LIME1-203ENST00000465591 IRF2BPLQ9H1B7 796 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 SMYD3Q9H7B4 428 aa23.28■■□□□ 1.32
LIME1-203ENST00000465591 ZNF263O14978 683 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 CALUO43852 315 aaPredicted RBP23.27■■□□□ 1.32
LIME1-203ENST00000465591 AKAP3O75969 853 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 BDNFP23560 247 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 ATICP31939 592 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 MAGEA11P43364 429 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 RAP1GAPP47736 663 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 CDH8P55286 799 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 FZD5Q13467 585 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 NCOA4Q13772 614 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 ZCWPW2Q504Y3 356 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 MDH1BQ5I0G3 518 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 OR6B3Q8NGW1 331 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 TMC2Q8TDI7 906 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 ERCC4Q92889 916 aaPredicted RBP23.27■■□□□ 1.32
LIME1-203ENST00000465591 SYAP1Q96A49 352 aaPredicted RBP23.27■■□□□ 1.32
LIME1-203ENST00000465591 E2F7Q96AV8 911 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 ZFYVE19Q96K21 471 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 GCNAQ96QF7 691 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 SDCBP2Q9H190 292 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 SNX25Q9H3E2 840 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 VRTNQ9H8Y1 702 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 TRPV5Q9NQA5 729 aa23.27■■□□□ 1.32
LIME1-203ENST00000465591 MAGEC2Q9UBF1 373 aaPredicted RBP23.27■■□□□ 1.32
LIME1-203ENST00000465591 NR2F2P24468 414 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 WEE1P30291 646 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 AP3M2P53677 418 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 NFIL3Q16649 462 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 ZNF699Q32M78 642 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 ZACNQ401N2 412 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 TXNDC8Q6A555 127 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 C4orf50Q6ZRC1 276 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 ZNF687Q8N1G0 1237 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 MAB21L3Q8N8X9 362 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 MYCBPAPQ8TBZ2 947 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 MYRFLQ96LU7 910 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 TMEM30AQ9NV96 361 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 VPS13AQ96RL7 3174 aa23.26■■□□□ 1.31
LIME1-203ENST00000465591 RIF1Q5UIP0 2472 aaKnown RBP23.26■■□□□ 1.31
LIME1-203ENST00000465591 USP34Q70CQ2 3546 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 DMDP11532 3685 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 FAM163BP0C2L3 166 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 CACNA2D1P54289 1103 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 CYP27A1Q02318 531 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 SCARA5Q6ZMJ2 495 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 ZNF852Q6ZMS4 543 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 SV2AQ7L0J3 742 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 CMTM8Q8IZV2 173 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 RIN3Q8TB24 985 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 TRMT2BQ96GJ1 504 aaKnown RBP23.25■■□□□ 1.31
LIME1-203ENST00000465591 OSBPL6Q9BZF3 934 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 CCL26Q9Y258 94 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 FRMD4BQ9Y2L6 1034 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 PIAS3Q9Y6X2 628 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 FANCMQ8IYD8 2048 aa23.25■■□□□ 1.31
LIME1-203ENST00000465591 CHADO15335 359 aa23.24■■□□□ 1.31
LIME1-203ENST00000465591 KIF20AO95235 890 aa23.24■■□□□ 1.31
LIME1-203ENST00000465591 TRIM49P0CI25 452 aa23.24■■□□□ 1.31
LIME1-203ENST00000465591 TRIM49CP0CI26 452 aa23.24■■□□□ 1.31
LIME1-203ENST00000465591 PTPN1P18031 435 aaKnown RBP23.24■■□□□ 1.31
LIME1-203ENST00000465591 NBL1P41271 181 aa23.24■■□□□ 1.31
LIME1-203ENST00000465591 SOX9P48436 509 aa23.24■■□□□ 1.31
LIME1-203ENST00000465591 USP46P62068 366 aa23.24■■□□□ 1.31
LIME1-203ENST00000465591 MAPRE1Q15691 268 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms