RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 PSMD2Q13200 908 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 HNRNPDQ14103 355 aaKnown RBP10.55□□□□□ -0.72
USP39-212ENST00000465514 TRIP6Q15654 476 aaKnown RBP10.55□□□□□ -0.72
USP39-212ENST00000465514 FBXO43Q4G163 708 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 ARHGAP15Q53QZ3 475 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 RILPL1Q5EBL4 403 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 ZNF280DQ6N043 979 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 ZPBP2Q6X784 338 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 LPCAT2Q7L5N7 544 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 RASSF3Q86WH2 238 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 TMEFF1Q8IYR6 380 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 KCTD17Q8N5Z5 321 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 MDGA1Q8NFP4 955 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 PGLYRP2Q96PD5 576 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 P2RY13Q9BPV8 354 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 FAM83CQ9BQN1 747 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 HAPLN2Q9GZV7 340 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 CRISPLD1Q9H336 500 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 ATXN3LQ9H3M9 355 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 PLEKHA5Q9HAU0 1116 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 DKK4Q9UBT3 224 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 CIZ1Q9ULV3 898 aaPredicted RBP10.55□□□□□ -0.72
USP39-212ENST00000465514 MAFFQ9ULX9 164 aa10.55□□□□□ -0.72
USP39-212ENST00000465514 TSC2P49815 1807 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 A0A087WV48 116 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 TTC26A0AVF1 554 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 VWA3AA6NCI4 1184 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 M0QZQ0 153 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 CLTAP09496 248 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 ARSAP15289 507 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 GABRR2P28476 465 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 LRPAP1P30533 357 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 EPHB3P54753 998 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 CYP4F8P98187 520 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 PLD1Q13393 1074 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 ZBTB6Q15916 424 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 ARSHQ5FYA8 562 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 TTC30AQ86WT1 665 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 MINDY1Q8N5J2 469 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 PIP4K2CQ8TBX8 421 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 RLN3Q8WXF3 142 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 BICD1Q96G01 975 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 CDK5RAP3Q96JB5 506 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 CNOT6LQ96LI5 555 aaKnown RBP10.54□□□□□ -0.72
USP39-212ENST00000465514 FNBP1Q96RU3 617 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 HNRNPABQ99729 332 aaKnown RBP10.54□□□□□ -0.72
USP39-212ENST00000465514 KCND2Q9NZV8 630 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 DACH1Q9UI36 760 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 KIF3AQ9Y496 699 aa10.54□□□□□ -0.72
USP39-212ENST00000465514 TIMM13Q9Y5L4 95 aaPredicted RBP10.54□□□□□ -0.72
USP39-212ENST00000465514 LACTBL1A8MY62 500 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 H0YCG3 227 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 ARHGAP6O43182 974 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 MAP3K13O43283 966 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 ATMINO43313 823 aaPredicted RBP10.53□□□□□ -0.72
USP39-212ENST00000465514 SH3BP5O60239 455 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 OAZ2O95190 189 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 OR4Q2P0C623 313 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 ITPKAP23677 461 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 WEE1P30291 646 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 TNFSF9P41273 254 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 ABCG1P45844 678 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 GUCY2FP51841 1108 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 NCKAP1LP55160 1127 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 AMPD2Q01433 879 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 YWHAHQ04917 246 aaPredicted RBP10.53□□□□□ -0.72
USP39-212ENST00000465514 GFPT1Q06210 699 aaPredicted RBP10.53□□□□□ -0.72
USP39-212ENST00000465514 CYP4F3Q08477 520 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 TMEM119Q4V9L6 283 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 PEAR1Q5VY43 1037 aaPredicted RBP10.53□□□□□ -0.72
USP39-212ENST00000465514 LYSMD4Q5XG99 296 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 SCUBE3Q8IX30 993 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 FRMD1Q8N878 549 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 BEST2Q8NFU1 509 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 OLIG1Q8TAK6 271 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 SPACA7Q96KW9 195 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 LARSQ9P2J5 1176 aaKnown RBP10.53□□□□□ -0.72
USP39-212ENST00000465514 PILRBQ9UKJ0 227 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 UBQLN1Q9UMX0 589 aaKnown RBP10.53□□□□□ -0.72
USP39-212ENST00000465514 CCL26Q9Y258 94 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 PCDHB9Q9Y5E1 797 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 SCN1AP35498 2009 aa10.53□□□□□ -0.72
USP39-212ENST00000465514 TEX15Q9BXT5 2789 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 H3BQV1 296 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 SOAT2O75908 522 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 FGF19O95750 216 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 CYP3A5P20815 502 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 GJA4P35212 333 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 P2RY2P41231 377 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 ALDH1A3P47895 512 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 AARSP49588 968 aaKnown RBP eCLIP10.52□□□□□ -0.73
USP39-212ENST00000465514 LIG4P49917 911 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 PPP2R3AQ06190 1150 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 DUSP4Q13115 394 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 DHX8Q14562 1220 aaKnown RBP10.52□□□□□ -0.73
USP39-212ENST00000465514 ENOX2Q16206 610 aaKnown RBP10.52□□□□□ -0.73
USP39-212ENST00000465514 KYAT1Q16773 422 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 C8orf34Q49A92 452 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 ARL6IP4Q66PJ3 421 aaKnown RBP10.52□□□□□ -0.73
USP39-212ENST00000465514 DSTYKQ6XUX3 929 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms