RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 TXNDC11Q6PKC3 985 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 DPH6Q7L8W6 267 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 SPEM1Q8N4L4 309 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 CXorf38Q8TB03 319 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 ZNF507Q8TCN5 953 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 CCDC127Q96BQ5 260 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 C7orf25Q9BPX7 421 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 BLZF1Q9H2G9 400 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 ABCB6Q9NP58 842 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 TDP1Q9NUW8 608 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 MAGEC2Q9UBF1 373 aaPredicted RBP16.56■□□□□ 0.24
HOXB3-204ENST00000465120 ZNF292O60281 2723 aa16.56■□□□□ 0.24
HOXB3-204ENST00000465120 ZNF638Q14966 1978 aaKnown RBP16.55■□□□□ 0.24
HOXB3-204ENST00000465120 LILRB5O75023 590 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 ATP2C2O75185 946 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 CLSTN1O94985 981 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 F13A1P00488 732 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 PDGFRBP09619 1106 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 CASP1P29466 404 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 HOXD13P35453 343 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 PSMC1P62191 440 aaKnown RBP16.55■□□□□ 0.24
HOXB3-204ENST00000465120 CYP27A1Q02318 531 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 SNRNP35Q16560 246 aaKnown RBP16.55■□□□□ 0.24
HOXB3-204ENST00000465120 LPAL2Q16609 132 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 CCDC142Q17RM4 750 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 MAMSTRQ6ZN01 415 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 C4orf50Q6ZRC1 276 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 PRR23BQ6ZRT6 265 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 UNC13DQ70J99 1090 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 HS2ST1Q7LGA3 356 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 ERMP1Q7Z2K6 904 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 TRAPPC11Q7Z392 1133 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 TMEM150AQ86TG1 271 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 MON1AQ86VX9 555 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 WDR49Q8IV35 697 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 SPATA18Q8TC71 538 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 NELL1Q92832 810 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 USP13Q92995 863 aaPredicted RBP16.55■□□□□ 0.24
HOXB3-204ENST00000465120 RMDN1Q96DB5 314 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 SYT15Q9BQS2 421 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 EPC1Q9H2F5 836 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 KIF9Q9HAQ2 790 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 MAGEF1Q9HAY2 307 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 AGPAT3Q9NRZ7 376 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 GMEB2Q9UKD1 530 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 CCL26Q9Y258 94 aa16.55■□□□□ 0.24
HOXB3-204ENST00000465120 GABRDO14764 452 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 LMO2P25791 158 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 GRIK1P39086 918 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 RUNX3Q13761 415 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 GAS6Q14393 721 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 HEATR6Q6AI08 1181 aaKnown RBP16.54■□□□□ 0.24
HOXB3-204ENST00000465120 TRIM68Q6AZZ1 485 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 Q6ZS52 159 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 EPM2AIP1Q7L775 607 aaPredicted RBP16.54■□□□□ 0.24
HOXB3-204ENST00000465120 CEP57L1Q8IYX8 460 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 FSIP1Q8NA03 581 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 XXYLT1Q8NBI6 393 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 FUBP3Q96I24 572 aaKnown RBP eCLIP16.54■□□□□ 0.24
HOXB3-204ENST00000465120 SNX25Q9H3E2 840 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 EBF3Q9H4W6 596 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 SLC39A2Q9NP94 309 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 CFAP45Q9UL16 551 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 CDH9Q9ULB4 789 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 PCDHA7Q9UN72 937 aa16.54■□□□□ 0.24
HOXB3-204ENST00000465120 KIF26AQ9ULI4 1882 aaPredicted RBP16.53■□□□□ 0.24
HOXB3-204ENST00000465120 CHURC1-FNTBB4DL54 471 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 TGFB1I1O43294 461 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 NOL4O94818 638 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 CKMP06732 381 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 BDNFP23560 247 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 ANXA13P27216 316 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 FNTBP49356 437 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 AMPD2Q01433 879 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 TRPC3Q13507 836 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 MAPRE1Q15691 268 aaKnown RBP16.53■□□□□ 0.24
HOXB3-204ENST00000465120 CFAP221Q4G0U5 840 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 CNNM4Q6P4Q7 775 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 GPR161Q8N6U8 529 aaKnown RBP16.53■□□□□ 0.24
HOXB3-204ENST00000465120 SCFD1Q8WVM8 642 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 MYLPFQ96A32 169 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 TRMT2BQ96GJ1 504 aaKnown RBP16.53■□□□□ 0.24
HOXB3-204ENST00000465120 CYP2S1Q96SQ9 504 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 PKMYT1Q99640 499 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 USP18Q9UMW8 372 aa16.53■□□□□ 0.24
HOXB3-204ENST00000465120 UBE4BO95155 1302 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 TRAV19A0A0A6YYK7 116 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 SOBPA7XYQ1 873 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 PHACTR2O75167 634 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 CST3P01034 146 aaPredicted RBP16.52■□□□□ 0.24
HOXB3-204ENST00000465120 USP17L7P0C7H9 530 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 TDGF1P13385 188 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 GNL1P36915 607 aaPredicted RBP16.52■□□□□ 0.24
HOXB3-204ENST00000465120 SNRPFP62306 86 aaKnown RBP16.52■□□□□ 0.24
HOXB3-204ENST00000465120 TNNC1P63316 161 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 CYP24A1Q07973 514 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 GRSF1Q12849 480 aaKnown RBP eCLIP16.52■□□□□ 0.24
HOXB3-204ENST00000465120 CUL4BQ13620 913 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 FAM171BQ6P995 826 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 DGLUCYQ7Z3D6 616 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms