RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 AVPR1AP37288 418 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 PLCB2Q00722 1185 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 TNK2Q07912 1038 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 CYP24A1Q07973 514 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 KNOP1Q1ED39 458 aaKnown RBP20.2■□□□□ 0.82
SF3A1-205ENST00000463818 BMT2Q1RMZ1 405 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 CFAP221Q4G0U5 840 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 C1orf228Q6PIY5 440 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 MON1AQ86VX9 555 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 SCN4BQ8IWT1 228 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 SUMF1Q8NBK3 374 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 MRPS31Q92665 395 aaKnown RBP20.2■□□□□ 0.82
SF3A1-205ENST00000463818 NELL1Q92832 810 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 MMS19Q96T76 1030 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 CGRRF1Q99675 332 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 PRMT8Q9NR22 394 aaPredicted RBP20.2■□□□□ 0.82
SF3A1-205ENST00000463818 GKN1Q9NS71 199 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 CDH9Q9ULB4 789 aa20.2■□□□□ 0.82
SF3A1-205ENST00000463818 NOL4O94818 638 aa20.19■□□□□ 0.82
SF3A1-205ENST00000463818 WARSP23381 471 aaKnown RBP20.19■□□□□ 0.82
SF3A1-205ENST00000463818 TXNDC11Q6PKC3 985 aa20.19■□□□□ 0.82
SF3A1-205ENST00000463818 RALGPS2Q86X27 583 aaPredicted RBP20.19■□□□□ 0.82
SF3A1-205ENST00000463818 ZBTB44Q8NCP5 570 aa20.19■□□□□ 0.82
SF3A1-205ENST00000463818 ZNF516Q92618 1163 aa20.19■□□□□ 0.82
SF3A1-205ENST00000463818 USP13Q92995 863 aaPredicted RBP20.19■□□□□ 0.82
SF3A1-205ENST00000463818 PAGE5Q96GU1 130 aa20.19■□□□□ 0.82
SF3A1-205ENST00000463818 FUBP3Q96I24 572 aaKnown RBP eCLIP20.19■□□□□ 0.82
SF3A1-205ENST00000463818 SYT15Q9BQS2 421 aa20.19■□□□□ 0.82
SF3A1-205ENST00000463818 IER2Q9BTL4 223 aa20.19■□□□□ 0.82
SF3A1-205ENST00000463818 CGNQ9P2M7 1197 aaKnown RBP20.19■□□□□ 0.82
SF3A1-205ENST00000463818 MAGEC2Q9UBF1 373 aaPredicted RBP20.19■□□□□ 0.82
SF3A1-205ENST00000463818 UXTQ9UBK9 157 aaPredicted RBP20.19■□□□□ 0.82
SF3A1-205ENST00000463818 CCL26Q9Y258 94 aa20.19■□□□□ 0.82
SF3A1-205ENST00000463818 VPS13AQ96RL7 3174 aa20.19■□□□□ 0.82
SF3A1-205ENST00000463818 TSC2P49815 1807 aa20.18■□□□□ 0.82
SF3A1-205ENST00000463818 SOBPA7XYQ1 873 aa20.18■□□□□ 0.82
SF3A1-205ENST00000463818 KLRC4O43908 158 aa20.18■□□□□ 0.82
SF3A1-205ENST00000463818 CTHP32929 405 aa20.18■□□□□ 0.82
SF3A1-205ENST00000463818 PSMC1P62191 440 aaKnown RBP20.18■□□□□ 0.82
SF3A1-205ENST00000463818 C4orf50Q6ZRC1 276 aa20.18■□□□□ 0.82
SF3A1-205ENST00000463818 MYRFLQ96LU7 910 aa20.18■□□□□ 0.82
SF3A1-205ENST00000463818 GZF1Q9H116 711 aaPredicted RBP20.18■□□□□ 0.82
SF3A1-205ENST00000463818 CRTAC1Q9NQ79 661 aa20.18■□□□□ 0.82
SF3A1-205ENST00000463818 RBM12Q9NTZ6 932 aaKnown RBP20.18■□□□□ 0.82
SF3A1-205ENST00000463818 TDP1Q9NUW8 608 aa20.18■□□□□ 0.82
SF3A1-205ENST00000463818 MIA3Q5JRA6 1907 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 GVINP1Q7Z2Y8 2422 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 ACTN4O43707 911 aaKnown RBP20.17■□□□□ 0.82
SF3A1-205ENST00000463818 EXOC3O60645 756 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 GNL1P36915 607 aaPredicted RBP20.17■□□□□ 0.82
SF3A1-205ENST00000463818 MAGEA11P43364 429 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 CXCL12P48061 93 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 STK4Q13043 487 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 LRRC32Q14392 662 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 GAS6Q14393 721 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 ITPRIPL2Q3MIP1 535 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 WDR44Q5JSH3 913 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 C12orf56Q8IXR9 622 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 DCLK2Q8N568 766 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 RUBCNQ92622 972 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 TRMT2BQ96GJ1 504 aaKnown RBP20.17■□□□□ 0.82
SF3A1-205ENST00000463818 HINFPQ9BQA5 517 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 FAM83CQ9BQN1 747 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 MRPL45Q9BRJ2 306 aaKnown RBP20.17■□□□□ 0.82
SF3A1-205ENST00000463818 FAM126AQ9BYI3 521 aaPredicted RBP20.17■□□□□ 0.82
SF3A1-205ENST00000463818 CFAP54Q96N23 3096 aa20.17■□□□□ 0.82
SF3A1-205ENST00000463818 A0A1B0GVL5 298 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 LILRB5O75023 590 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 TADA3O75528 432 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 FAM163BP0C2L3 166 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 TDGF1P13385 188 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 BDNFP23560 247 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 CMA1P23946 247 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 CCR3P51677 355 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 TRPC3Q13507 836 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 PON2Q15165 354 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 MAPRE1Q15691 268 aaKnown RBP20.16■□□□□ 0.82
SF3A1-205ENST00000463818 WDR72Q3MJ13 1102 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 DGKKQ5KSL6 1271 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 SPEM1Q8N4L4 309 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 MYLPFQ96A32 169 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 CHAMP1Q96JM3 812 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 CYP2S1Q96SQ9 504 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 SNX25Q9H3E2 840 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 ZDHHC9Q9Y397 364 aa20.16■□□□□ 0.82
SF3A1-205ENST00000463818 TACC1O75410 805 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 PFKFB1P16118 471 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 GRIK1P39086 918 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 NRLP54845 237 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 MYL6P60660 151 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 SATB1Q01826 763 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 CYP27A1Q02318 531 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 PSMD2Q13200 908 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 PPP2R5DQ14738 602 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 KMT5BQ4FZB7 885 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 VSTM1Q6UX27 236 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 KIAA2013Q8IYS2 634 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 OR6B3Q8NGW1 331 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 GOLGA5Q8TBA6 731 aa20.15■□□□□ 0.82
SF3A1-205ENST00000463818 MYCBPAPQ8TBZ2 947 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms