RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 FAM160A1Q05DH4 1040 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 POSTNQ15063 836 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 ZNF77Q15935 545 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 SYT13Q7L8C5 426 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 CPA6Q8N4T0 437 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 KRI1Q8N9T8 703 aaKnown RBP22.31■■□□□ 1.16
CPSF7-209ENST00000463244 RPLP0P6Q8NHW5 317 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 OSCP1Q8WVF1 389 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 EZH1Q92800 747 aaPredicted RBP22.31■■□□□ 1.16
CPSF7-209ENST00000463244 EXOC4Q96A65 974 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 HVCN1Q96D96 273 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 TMX3Q96JJ7 454 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 MYRFLQ96LU7 910 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 ACBD6Q9BR61 282 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 DUSP15Q9H1R2 295 aaPredicted RBP22.31■■□□□ 1.16
CPSF7-209ENST00000463244 L1RE1Q9UN81 338 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 IGF2RP11717 2491 aa22.31■■□□□ 1.16
CPSF7-209ENST00000463244 KCNK5O95279 499 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 BMP15O95972 392 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 CYP2F1P24903 491 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 POLR2BP30876 1174 aaKnown RBP22.3■■□□□ 1.16
CPSF7-209ENST00000463244 DDIT3P35638 169 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 WNT7BP56706 349 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 RPL10AP62906 217 aaKnown RBP22.3■■□□□ 1.16
CPSF7-209ENST00000463244 DDR2Q16832 855 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 ERICH6BQ5W0A0 696 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 TCEAL6Q6IPX3 200 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 SFR1Q86XK3 245 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 TCEAL3Q969E4 200 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 PKMYT1Q99640 499 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 STRA6Q9BX79 667 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 DUS2Q9NX74 493 aaKnown RBP22.3■■□□□ 1.16
CPSF7-209ENST00000463244 DDX43Q9NXZ2 648 aaKnown RBP22.3■■□□□ 1.16
CPSF7-209ENST00000463244 EBF1Q9UH73 591 aa22.3■■□□□ 1.16
CPSF7-209ENST00000463244 APBB3O95704 486 aa22.29■■□□□ 1.16
CPSF7-209ENST00000463244 TFAMQ00059 246 aaKnown RBP22.29■■□□□ 1.16
CPSF7-209ENST00000463244 USP4Q13107 963 aa22.29■■□□□ 1.16
CPSF7-209ENST00000463244 RABEP1Q15276 862 aa22.29■■□□□ 1.16
CPSF7-209ENST00000463244 INTS6LQ5JSJ4 861 aaKnown RBP22.29■■□□□ 1.16
CPSF7-209ENST00000463244 RNF43Q68DV7 783 aa22.29■■□□□ 1.16
CPSF7-209ENST00000463244 C1orf127Q8N9H9 656 aa22.29■■□□□ 1.16
CPSF7-209ENST00000463244 CD101Q93033 1021 aa22.29■■□□□ 1.16
CPSF7-209ENST00000463244 SLC22A12Q96S37 553 aa22.29■■□□□ 1.16
CPSF7-209ENST00000463244 TMEM206Q9H813 350 aa22.29■■□□□ 1.16
CPSF7-209ENST00000463244 TRPC7Q9HCX4 862 aa22.29■■□□□ 1.16
CPSF7-209ENST00000463244 AGAP1Q9UPQ3 857 aa22.29■■□□□ 1.16
CPSF7-209ENST00000463244 SPEGQ15772 3267 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 HELZP42694 1942 aaKnown RBP22.28■■□□□ 1.16
CPSF7-209ENST00000463244 DCLK1O15075 740 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 HUS1O60921 280 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 ITGB3P05106 788 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 CKMP06732 381 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 USP17L7P0C7H9 530 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 ACAT1P24752 427 aaKnown RBP22.28■■□□□ 1.16
CPSF7-209ENST00000463244 MYL7Q01449 175 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 KCNA1Q09470 495 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 DMC1Q14565 340 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 ELF2Q15723 593 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 EML3Q32P44 896 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 BRSK2Q8IWQ3 736 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 TMEM86AQ8N2M4 240 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 ZSWIM2Q8NEG5 633 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 CXorf38Q8TB03 319 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 ATP2A3Q93084 1043 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 ACDQ96AP0 544 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 CYP2S1Q96SQ9 504 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 WNT6Q9Y6F9 365 aa22.28■■□□□ 1.16
CPSF7-209ENST00000463244 THADAQ6YHU6 1953 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 TRAV19A0A0A6YYK7 116 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 RHOBTB1O94844 696 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 IFNAR2P48551 515 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 CCDC142Q17RM4 750 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 CFAP221Q4G0U5 840 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 DYMQ7RTS9 669 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 OSTM1Q86WC4 334 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 LRRC52Q8N7C0 313 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 SPATA18Q8TC71 538 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 FAM213AQ9BRX8 229 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 GDAP2Q9NXN4 497 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 GTF3C4Q9UKN8 822 aa22.27■■□□□ 1.16
CPSF7-209ENST00000463244 BCLAF3A2AJT9 711 aaKnown RBP22.26■■□□□ 1.15
CPSF7-209ENST00000463244 CREB5Q02930 508 aa22.26■■□□□ 1.15
CPSF7-209ENST00000463244 SF3A1Q15459 793 aaKnown RBP22.26■■□□□ 1.15
CPSF7-209ENST00000463244 C8orf34Q49A92 452 aa22.26■■□□□ 1.15
CPSF7-209ENST00000463244 SCARA3Q6AZY7 606 aa22.26■■□□□ 1.15
CPSF7-209ENST00000463244 TTC16Q8NEE8 873 aa22.26■■□□□ 1.15
CPSF7-209ENST00000463244 CACTINQ8WUQ7 758 aaKnown RBP22.26■■□□□ 1.15
CPSF7-209ENST00000463244 SAAL1Q96ER3 474 aa22.26■■□□□ 1.15
CPSF7-209ENST00000463244 FUBP3Q96I24 572 aaKnown RBP eCLIP22.26■■□□□ 1.15
CPSF7-209ENST00000463244 EPSTI1Q96J88 318 aa22.26■■□□□ 1.15
CPSF7-209ENST00000463244 EDEM2Q9BV94 578 aa22.26■■□□□ 1.15
CPSF7-209ENST00000463244 MRPL44Q9H9J2 332 aaKnown RBP22.26■■□□□ 1.15
CPSF7-209ENST00000463244 GCNT4Q9P109 453 aa22.26■■□□□ 1.15
CPSF7-209ENST00000463244 SEL1LQ9UBV2 794 aa22.26■■□□□ 1.15
CPSF7-209ENST00000463244 ITGA11Q9UKX5 1188 aa22.26■■□□□ 1.15
CPSF7-209ENST00000463244 EXOC7Q9UPT5 735 aa22.26■■□□□ 1.15
CPSF7-209ENST00000463244 CD2BP2O95400 341 aaKnown RBP22.25■■□□□ 1.15
CPSF7-209ENST00000463244 CAVIN2O95810 425 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 TCF3P15923 654 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 LHX1P48742 406 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms