RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 MBD3O95983 291 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 MYL4P12829 197 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 CEBPBP17676 345 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 INCA1Q0VD86 236 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 CCDC40Q4G0X9 1142 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 B3GALNT2Q8NCR0 500 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 SLC35C1Q96A29 364 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 MYLPFQ96A32 169 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 ELOVL4Q9GZR5 314 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 A0A0C4DFX4 3053 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 TRIM66O15016 1216 aa13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 CLSTN1O94985 981 aa13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 DDX6P26196 483 aaKnown RBP eCLIP13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 ASPAP45381 313 aa13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 TAF12Q16514 161 aa13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 ARHGAP15Q53QZ3 475 aa13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 WDR44Q5JSH3 913 aa13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 TCERG1LQ5VWI1 586 aa13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 SHKBP1Q8TBC3 707 aa13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 MYRFLQ96LU7 910 aa13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 PI4K2AQ9BTU6 479 aa13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 RAB20Q9NX57 234 aa13.93□□□□□ -0.18
R3HDM1-213ENST00000463230 TMEM221A6NGB7 291 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 M0R296 226 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 MOSPD3O75425 235 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 ASGR2P07307 311 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 PDGFRBP09619 1106 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 SRFP11831 508 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 DCAF17Q5H9S7 520 aaPredicted RBP13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 HOMEZQ8IX15 550 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 CRYBG2Q8N1P7 616 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 SLC44A3Q8N4M1 653 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 ELSPBP1Q96BH3 223 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 C8orf48Q96LL4 319 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 C11orf16Q9NQ32 467 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 SLC2A4RGQ9NR83 387 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 CCDC192P0DO97 292 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 CYP2F1P24903 491 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 ERCC5P28715 1186 aaPredicted RBP13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 CCR2P41597 374 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 PSMC1P62191 440 aaKnown RBP13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 CETN1Q12798 172 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 MDH1BQ5I0G3 518 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 SMYD5Q6GMV2 418 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 ING5Q8WYH8 240 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 TCEAL4Q96EI5 215 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 PCED1BQ96HM7 432 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 LPIN3Q9BQK8 851 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 SDCBP2Q9H190 292 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 NME7Q9Y5B8 376 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 NUMBLQ9Y6R0 609 aa13.92□□□□□ -0.18
R3HDM1-213ENST00000463230 NUP210Q8TEM1 1887 aaPredicted RBP13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 ATP2C2O75185 946 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 SOAT2O75908 522 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 ANXA13P27216 316 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 NLRP12P59046 1061 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 YWHAEP62258 255 aaKnown RBP13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 SCARA5Q6ZMJ2 495 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 TRIM59Q8IWR1 403 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 SMARCD2Q92925 531 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 MCRS1Q96EZ8 462 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 EEF2KMTQ96G04 330 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 ASB16Q96NS5 453 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 IL21Q9HBE4 155 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 APOBEC3GQ9HC16 384 aaKnown RBP13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 ZNF334Q9HCZ1 680 aaPredicted RBP13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 OBP2AQ9NY56 170 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 WNT16Q9UBV4 365 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 DENND4CQ5VZ89 1909 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 SLC38A8A6NNN8 435 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 HCRTO43612 131 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 HMGA1P17096 107 aaKnown RBP13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 PFKLP17858 780 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 FMO5P49326 533 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 CYP27A1Q02318 531 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 RBM43Q6ZSC3 357 aaKnown RBP13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 GAREM2Q75VX8 874 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 ASIC4Q96FT7 647 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 LRFN3Q9BTN0 628 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 MMRN2Q9H8L6 949 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 COMMD8Q9NX08 183 aa13.91□□□□□ -0.18
R3HDM1-213ENST00000463230 GABRR2P28476 465 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 RAP1GAPP47736 663 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 PPP3CCP48454 512 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 NDST1P52848 882 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 CDH8P55286 799 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 TEAD2Q15562 447 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 CBWD6Q4V339 395 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 CBWD3Q5JTY5 395 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 CBWD5Q5RIA9 395 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 SPOPLQ6IQ16 392 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 PARM1Q6UWI2 310 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 GIPC2Q8TF65 315 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 DEPDC1BQ8WUY9 529 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 SEMA4DQ92854 862 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 TTLL2Q9BWV7 592 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 NT5C1AQ9BXI3 368 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 SRRTQ9BXP5 876 aaKnown RBP13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 B3GNT5Q9BYG0 378 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 DPEP3Q9H4B8 488 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms