RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 BEST2Q8NFU1 509 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 FNIP1Q8TF40 1166 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 RBM41Q96IZ5 413 aaKnown RBP10.72□□□□□ -0.69
MSH5-211ENST00000463144 ATP6V1G3Q96LB4 118 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 TRIM6Q9C030 488 aaPredicted RBP10.72□□□□□ -0.69
MSH5-211ENST00000463144 FAM124BQ9H5Z6 455 aaPredicted RBP10.72□□□□□ -0.69
MSH5-211ENST00000463144 WDR35Q9P2L0 1181 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 KIAA1257Q9ULG3 409 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 GABRQQ9UN88 632 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 hCG_1818297A0A087WSY0 165 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 PIRO00625 290 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 SPTLC1O15269 473 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 HCRTO43612 131 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 DUSP11O75319 330 aaKnown RBP10.72□□□□□ -0.69
MSH5-211ENST00000463144 SHBGP04278 402 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 GBP1P32455 592 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 CDKN2BP42772 138 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 PKDCCQ504Y2 493 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 DNAJC21Q5F1R6 531 aaKnown RBP10.72□□□□□ -0.69
MSH5-211ENST00000463144 SPDYCQ5MJ68 293 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 RHBDF2Q6PJF5 856 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 PRUNE1Q86TP1 453 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 ACOT1Q86TX2 421 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 TTC30AQ86WT1 665 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 TTC39CQ8N584 583 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 LRRC52Q8N7C0 313 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 C7orf31Q8N865 590 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 SMG8Q8ND04 991 aaKnown RBP10.72□□□□□ -0.69
MSH5-211ENST00000463144 PIWIL1Q96J94 861 aaKnown RBP10.72□□□□□ -0.69
MSH5-211ENST00000463144 KATNAL1Q9BW62 490 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 SEMA4AQ9H3S1 761 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 SYNCQ9H7C4 482 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 AAASQ9NRG9 546 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 PARP2Q9UGN5 583 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 TLL2Q9Y6L7 1015 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 E5RJQ4 531 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 SHOX2O60902 331 aaPredicted RBP10.71□□□□□ -0.69
MSH5-211ENST00000463144 GABBR2O75899 941 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 C6orf222P0C671 652 aaPredicted RBP10.71□□□□□ -0.69
MSH5-211ENST00000463144 PTPN7P35236 360 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 TM4SF4P48230 202 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 COPS2P61201 443 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 SKOR1P84550 965 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 SOX4Q06945 474 aaPredicted RBP10.71□□□□□ -0.69
MSH5-211ENST00000463144 RAB6CQ53S08 254 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 KCNT1Q5JUK3 1230 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 ZFYVE27Q5T4F4 411 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 SYDE1Q6ZW31 735 aaPredicted RBP10.71□□□□□ -0.69
MSH5-211ENST00000463144 POLNQ7Z5Q5 900 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 FAM228AQ86W67 206 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 NME8Q8N427 588 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 TRIB2Q92519 343 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 RAB6CQ9H0N0 254 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 PABPC3Q9H361 631 aaKnown RBP10.71□□□□□ -0.69
MSH5-211ENST00000463144 DPEP3Q9H4B8 488 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 GOLGA2P5Q9HBQ8 144 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 HOMER3Q9NSC5 361 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 WHRNQ9P202 907 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 ASIC3Q9UHC3 531 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 PRDM4Q9UKN5 801 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 UBQLN1Q9UMX0 589 aaKnown RBP10.71□□□□□ -0.69
MSH5-211ENST00000463144 IPPQ9Y573 584 aa10.71□□□□□ -0.69
MSH5-211ENST00000463144 KIF3CO14782 793 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 LIASO43766 372 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 FGFR1P11362 822 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 CYBAP13498 195 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 KCNE1P15382 129 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 ATF7P17544 494 aaPredicted RBP10.7□□□□□ -0.7
MSH5-211ENST00000463144 ITIH2P19823 946 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 CAP1Q01518 475 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 TAF5Q15542 800 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 SMTNL2Q2TAL5 461 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 GOLGA7BQ2TAP0 167 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 GNASQ5JWF2 1037 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 ZNF618Q5T7W0 954 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 SH3PXD2AQ5TCZ1 1133 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 EMC10Q5UCC4 262 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 PMF1Q6P1K2 205 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 FAM183BPQ6ZVS7 135 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 GRK7Q8WTQ7 553 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 WNT8BQ93098 351 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 CCDC114Q96M63 670 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 ZWILCHQ9H900 591 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 DDX56Q9NY93 547 aaKnown RBP10.7□□□□□ -0.7
MSH5-211ENST00000463144 MTRF1LQ9UGC7 380 aaKnown RBP10.7□□□□□ -0.7
MSH5-211ENST00000463144 DNPEPQ9ULA0 475 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 LRRD1A4D1F6 860 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 HMGB1P1B2RPK0 211 aaPredicted RBP10.7□□□□□ -0.7
MSH5-211ENST00000463144 CA12O43570 354 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 PGK1P00558 417 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 NUDT17P0C025 328 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 MYZAPP0CAP1 466 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 GNAT1P11488 350 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 KLRC2P26717 231 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 ACTN2P35609 894 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 CHKAP35790 457 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 CETN2P41208 172 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 PSMC4P43686 418 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 RGS7P49802 495 aa10.7□□□□□ -0.7
MSH5-211ENST00000463144 GJA9P57773 515 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms