RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 LMO2P25791 158 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 TARSP26639 723 aaKnown RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 ATICP31939 592 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 MAGEA11P43364 429 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 SYKP43405 635 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 KPNA1P52294 538 aaPredicted RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 NLRP12P59046 1061 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 STK4Q13043 487 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 TRPC3Q13507 836 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 DDR2Q16832 855 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 KMT5BQ4FZB7 885 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 LMBRD2Q68DH5 695 aaPredicted RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 VSTM1Q6UX27 236 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 C4orf50Q6ZRC1 276 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 MON1AQ86VX9 555 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 OSTM1Q86WC4 334 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 RALGPS2Q86X27 583 aaPredicted RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 SPATA2LQ8IUW3 424 aaPredicted RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 GPIHBP1Q8IV16 184 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 SLC9A9Q8IVB4 645 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 MAML2Q8IZL2 1156 aaPredicted RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 CMTM8Q8IZV2 173 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 ZNF687Q8N1G0 1237 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 CELF5Q8N6W0 485 aaKnown RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 BPIFB1Q8TDL5 484 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 ZNF516Q92618 1163 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 MRPS31Q92665 395 aaKnown RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 CCDC47Q96A33 483 aaKnown RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 SYAP1Q96A49 352 aaPredicted RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 CCDC127Q96BQ5 260 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 RSPRY1Q96DX4 576 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 TRMT2BQ96GJ1 504 aaKnown RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 MYRFLQ96LU7 910 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 LRRC3BQ96PB8 259 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 MMS19Q96T76 1030 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 CGRRF1Q99675 332 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 FAM126AQ9BYI3 521 aaPredicted RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 SNX25Q9H3E2 840 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 LMAN1LQ9HAT1 526 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 EXOC1Q9NV70 894 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 DMAC2Q9NW81 257 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 HPSEQ9Y251 543 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 PIAS3Q9Y6X2 628 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 KIF26AQ9ULI4 1882 aaPredicted RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 OTOGLQ3ZCN5 2332 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 PTPRDP23468 1912 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 PTPRJQ12913 1337 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 SDK1Q7Z5N4 2213 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 A0A1W2PQ27 194 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 A0A1W2PQ64 194 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 A0A1W2PQD8 194 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 SLC38A8A6NNN8 435 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 PHACTR2O75167 634 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 ATP2C2O75185 946 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 NOL4O94818 638 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 LMNAP02545 664 aaKnown RBP7.79□□□□□ -1.16
PTPRF-210ENST00000463041 PDGFRBP09619 1106 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 CCNE1P24864 410 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 AVPR1AP37288 418 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 CDR1P51861 262 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 NRLP54845 237 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 CLDN10P78369 228 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 CYP4F8P98187 520 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 CSTF1Q05048 431 aaKnown RBP7.79□□□□□ -1.16
PTPRF-210ENST00000463041 ZNF268Q14587 947 aaPredicted RBP7.79□□□□□ -1.16
PTPRF-210ENST00000463041 PPP2R5DQ14738 602 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 WDR72Q3MJ13 1102 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 STXBP5Q5T5C0 1151 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 TMEM150AQ86TG1 271 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 SCN4BQ8IWT1 228 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 GRAMD1CQ8IYS0 662 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 ADSSL1Q8N142 457 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 MAB21L3Q8N8X9 362 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 FSIP1Q8NA03 581 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 MYCBPAPQ8TBZ2 947 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 PARD3BQ8TEW8 1205 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 KBTBD7Q8WVZ9 684 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 FAM84AQ96KN4 292 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 SPATA17Q96L03 361 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 SYT15Q9BQS2 421 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 CHRDQ9H2X0 955 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 KCTD10Q9H3F6 313 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 VRTNQ9H8Y1 702 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 KIF9Q9HAQ2 790 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 GKN1Q9NS71 199 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 TDP1Q9NUW8 608 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 EHD2Q9NZN4 543 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 NDRG2Q9UN36 371 aaKnown RBP7.79□□□□□ -1.16
PTPRF-210ENST00000463041 MAGED2Q9UNF1 606 aaPredicted RBP7.79□□□□□ -1.16
PTPRF-210ENST00000463041 RALGAPA1Q6GYQ0 2036 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 OBSL1O75147 1896 aa7.79□□□□□ -1.16
PTPRF-210ENST00000463041 MYO18AQ92614 2054 aaKnown RBP7.79□□□□□ -1.16
PTPRF-210ENST00000463041 PATJQ8NI35 1801 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 IKBKBO14920 756 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 CALUO43852 315 aaPredicted RBP7.78□□□□□ -1.16
PTPRF-210ENST00000463041 KINO60870 393 aaKnown RBP7.78□□□□□ -1.16
PTPRF-210ENST00000463041 RHOBTB3O94955 611 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 C4BPAP04003 597 aaKnown RBP7.78□□□□□ -1.16
PTPRF-210ENST00000463041 RPN1P04843 607 aaKnown RBP7.78□□□□□ -1.16
PTPRF-210ENST00000463041 CHRNB1P11230 501 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms