RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 VPS53Q5VIR6 699 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 RNF220Q5VTB9 566 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 DARS2Q6PI48 645 aaKnown RBP3.44□□□□□ -1.86
CNOT11-203ENST00000462489 APOA5Q6Q788 366 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 TSHZ1Q6ZSZ6 1077 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 C14orf80Q86SX3 495 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 FMNL3Q8IVF7 1028 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 DNAJC5GQ8N7S2 189 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 ATRIPQ8WXE1 791 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 FKBP10Q96AY3 582 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 NMD3Q96D46 503 aaKnown RBP3.44□□□□□ -1.86
CNOT11-203ENST00000462489 APIPQ96GX9 242 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 UROC1Q96N76 676 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 ACTRT3Q9BYD9 372 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 XPNPEP3Q9NQH7 507 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 SERTAD4Q9NUC0 356 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 TPCN1Q9ULQ1 816 aa3.44□□□□□ -1.86
CNOT11-203ENST00000462489 CFAP69A5D8W1 941 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 TRIM43BA6NCK2 446 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 VWC2LB2RUY7 222 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 TPP1O14773 563 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 TBX3O15119 743 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 SLC16A3O15427 465 aaKnown RBP3.43□□□□□ -1.86
CNOT11-203ENST00000462489 TBC1D4O60343 1298 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 PPFIA2O75334 1257 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 URI1O94763 535 aaPredicted RBP3.43□□□□□ -1.86
CNOT11-203ENST00000462489 ONECUT2O95948 504 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 CHRM2P08172 466 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 MYBP10242 640 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 MYF5P13349 255 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 FBLP22087 321 aaKnown RBP3.43□□□□□ -1.86
CNOT11-203ENST00000462489 SLC7A1P30825 629 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 PLA2G5P39877 138 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 LILRA4P59901 499 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 NHLH1Q02575 133 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 SLC13A2Q13183 592 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 E2F2Q14209 437 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 GRM3Q14832 879 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 CNGA2Q16280 664 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 MGAT5BQ3V5L5 792 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 PLAC9Q5JTB6 97 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 ZNF618Q5T7W0 954 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 PEG10Q86TG7 708 aaKnown RBP3.43□□□□□ -1.86
CNOT11-203ENST00000462489 ADGRG3Q86Y34 549 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 DNAJC10Q8IXB1 793 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.43□□□□□ -1.86
CNOT11-203ENST00000462489 FBXO41Q8TF61 875 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 LRTOMTQ8WZ04 291 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 TFAP2BQ92481 460 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 TTC17Q96AE7 1141 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 TRIM43Q96BQ3 446 aaPredicted RBP3.43□□□□□ -1.86
CNOT11-203ENST00000462489 MSLNLQ96KJ4 702 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 CRAMP1Q96RY5 1269 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 TTYH3Q9C0H2 523 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 LRRC27Q9C0I9 530 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 PRDM13Q9H4Q3 707 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 A1CFQ9NQ94 594 aaKnown RBP3.43□□□□□ -1.86
CNOT11-203ENST00000462489 DDX20Q9UHI6 824 aaKnown RBP3.43□□□□□ -1.86
CNOT11-203ENST00000462489 NDRG4Q9ULP0 352 aaKnown RBP3.43□□□□□ -1.86
CNOT11-203ENST00000462489 SSX2IPQ9Y2D8 614 aa3.43□□□□□ -1.86
CNOT11-203ENST00000462489 FRMPD2Q68DX3 1309 aaPredicted RBP3.43□□□□□ -1.86
CNOT11-203ENST00000462489 MBD3L4A6NDZ8 208 aaPredicted RBP3.42□□□□□ -1.86
CNOT11-203ENST00000462489 MBD3L3A6NE82 208 aaPredicted RBP3.42□□□□□ -1.86
CNOT11-203ENST00000462489 MGST3O14880 152 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 PPM1DO15297 605 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 MGEA5O60502 916 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 PARNO95453 639 aaKnown RBP3.42□□□□□ -1.86
CNOT11-203ENST00000462489 RHOP08100 348 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 ELFN1P0C7U0 828 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 ZFXP17010 805 aaPredicted RBP3.42□□□□□ -1.86
CNOT11-203ENST00000462489 RHCEP18577 417 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 ATF3P18847 181 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 ITPKBP27987 946 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 DGKEP52429 567 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 RHDQ02161 417 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 GALEQ14376 348 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 HLTFQ14527 1009 aaKnown RBP eCLIP3.42□□□□□ -1.86
CNOT11-203ENST00000462489 LLGL1Q15334 1064 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 TBCCQ15814 346 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 FBXO42Q6P3S6 717 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 ZNF551Q7Z340 670 aaPredicted RBP3.42□□□□□ -1.86
CNOT11-203ENST00000462489 WDR53Q7Z5U6 358 aaPredicted RBP3.42□□□□□ -1.86
CNOT11-203ENST00000462489 MICU3Q86XE3 530 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 DGKHQ86XP1 1220 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 COL23A1Q86Y22 540 aaPredicted RBP3.42□□□□□ -1.86
CNOT11-203ENST00000462489 SLC15A4Q8N697 577 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 FAM156AQ8NDB6 213 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 MAML1Q92585 1016 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 C8orf48Q96LL4 319 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 BBC3Q96PG8 261 aaPredicted RBP3.42□□□□□ -1.86
CNOT11-203ENST00000462489 PCGF6Q9BYE7 350 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 BTBD1Q9H0C5 482 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 BHMT2Q9H2M3 363 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 SERHLQ9NQF3 203 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 DDX21Q9NR30 783 aaKnown RBP eCLIP3.42□□□□□ -1.86
CNOT11-203ENST00000462489 ZSCAN32Q9NX65 697 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 AFF4Q9UHB7 1163 aaKnown RBP3.42□□□□□ -1.86
CNOT11-203ENST00000462489 USP19O94966 1318 aa3.42□□□□□ -1.86
CNOT11-203ENST00000462489 COL11A2P13942 1736 aaPredicted RBP3.41□□□□□ -1.86
CNOT11-203ENST00000462489 LINC00473A8K010 186 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms