RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ECI2O75521 394 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 RPP40O75818 363 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 SLITRK3O94933 977 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 PAPSS2O95340 614 aaPredicted RBP6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 YEATS4O95619 227 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 ATP4AP20648 1035 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 RPA1P27694 616 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 CDC25AP30304 524 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 HOXA6P31267 233 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 YWHABP31946 246 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 LONP1P36776 959 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 TXLNAP40222 546 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 UBA7P41226 1012 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 PHKA2P46019 1235 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 ME1P48163 572 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 GLUD2P49448 558 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 SCAPQ12770 1279 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 MTERF2Q49AM1 385 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 XKR3Q5GH77 459 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 TANGO2Q6ICL3 276 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 OTUD6AQ7L8S5 288 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 HS2ST1Q7LGA3 356 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 CATSPER3Q86XQ3 398 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 C4orf19Q8IY42 314 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 TXLNBQ8N3L3 684 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 IGSF22Q8N9C0 903 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 LINC00301Q8NCQ3 95 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 DEFB124Q8NES8 71 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 KIAA1524Q8TCG1 905 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 SNX29Q8TEQ0 813 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 GAB3Q8WWW8 586 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 DNASE1L2Q92874 299 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 MCRS1Q96EZ8 462 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 CALML4Q96GE6 196 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 ZNF668Q96K58 619 aaPredicted RBP6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 AK8Q96MA6 479 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 CCDC43Q96MW1 224 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 NACC1Q96RE7 527 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 HSD17B14Q9BPX1 270 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 POLR3CQ9BUI4 534 aaPredicted RBP6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 HERC2P3Q9BVR0 1158 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 KRTAP9-2Q9BYQ4 174 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 SCAND2PQ9GZW5 306 aaPredicted RBP6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 CSRNP2Q9H175 543 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 OSBPL2Q9H1P3 480 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 BRD9Q9H8M2 597 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 C2orf42Q9NWW7 574 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 USP25Q9UHP3 1055 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 FBXO2Q9UK22 296 aaPredicted RBP6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 SRPRBQ9Y5M8 271 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 NUP205Q92621 2012 aa6.5□□□□□ -1.37
SMARCC1-204ENST00000462198 APC2O95996 2303 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 ABCA7Q8IZY2 2146 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 A0A087WWV3 80 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 SERTM1A2A2V5 107 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 TMEM150BA6NC51 233 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 ZBTB42B2RXF5 422 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 CDX4O14627 284 aaPredicted RBP6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 CCL16O15467 120 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 ZNF862O60290 1169 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 MED24O75448 989 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 CSDE1O75534 798 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 C1QL1O75973 258 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 C22orf31O95567 290 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 CAVIN2O95810 425 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 SPATA31C1P0DKV0 1188 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 CCDC192P0DO97 292 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 MUTP22033 750 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 CCNE1P24864 410 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 RDXP35241 583 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 SARNPP82979 210 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 DSG1Q02413 1049 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 GRIN1Q05586 938 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 TLR1Q15399 786 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 UAP1L1Q3KQV9 507 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 XKR9Q5GH70 373 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 PLA2G4FQ68DD2 849 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 EFCAB12Q6NXP0 572 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 MRPL14Q6P1L8 145 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 ALDH16A1Q8IZ83 802 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 CHCHD4Q8N4Q1 142 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 RNF217Q8TC41 542 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 ING5Q8WYH8 240 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 ZC3H10Q96K80 434 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 CEP170P1Q96L14 293 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 CLIC6Q96NY7 704 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 PLIN2Q99541 437 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 TMEM175Q9BSA9 504 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 NIFKQ9BYG3 293 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 TMEM9BQ9NQ34 198 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 CHST12Q9NRB3 414 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 RAB6BQ9NRW1 208 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 RBM12Q9NTZ6 932 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 FAM53CQ9NYF3 392 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 WRAP73Q9P2S5 460 aaPredicted RBP6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 RCOR1Q9UKL0 485 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 AKT3Q9Y243 479 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 EML5Q05BV3 1969 aa6.49□□□□□ -1.37
SMARCC1-204ENST00000462198 PDCD11Q14690 1871 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-204ENST00000462198 SPAARA0A1B0GVQ0 90 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms