RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 TMLHEQ9NVH6 421 aa11.7□□□□□ -0.54
CBX3-205ENST00000462165 DPP3Q9NY33 737 aa11.7□□□□□ -0.54
CBX3-205ENST00000462165 UXTQ9UBK9 157 aaPredicted RBP11.7□□□□□ -0.54
CBX3-205ENST00000462165 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
CBX3-205ENST00000462165 FREM2Q5SZK8 3169 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 PLXND1Q9Y4D7 1925 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 TMEM8BA6NDV4 472 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 KPNA7A9QM74 516 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 CDX4O14627 284 aaPredicted RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 SLC26A4O43511 780 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 TRAK2O60296 914 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 EIF5BO60841 1220 aaKnown RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 PRPF40AO75400 957 aaKnown RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 FAM13AO94988 1023 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 CSRP1P21291 193 aaKnown RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 GBP1P32455 592 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 ABCD1P33897 745 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 GPR15P49685 360 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 ACOT2P49753 483 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 GTF2BQ00403 316 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 TSPY1Q01534 308 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 USP4Q13107 963 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 NFE2Q16621 373 aaPredicted RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 EML3Q32P44 896 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 SV2CQ496J9 727 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 USP39Q53GS9 565 aaKnown RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 RILPL1Q5EBL4 403 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 MYCT1Q8N699 235 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 STKLD1Q8NE28 680 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 CCDC26Q8TAB7 109 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 LEO1Q8WVC0 666 aaPredicted RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 ATP2A3Q93084 1043 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 TRMT2BQ96GJ1 504 aaKnown RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 MYRFLQ96LU7 910 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 FIZ1Q96SL8 496 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 PI4K2AQ9BTU6 479 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 ADAM33Q9BZ11 813 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 TMEM206Q9H813 350 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 PARVGQ9HBI0 331 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 TMEM9BQ9NQ34 198 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 DUS2Q9NX74 493 aaKnown RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 MAGED2Q9UNF1 606 aaPredicted RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 ASCC3Q8N3C0 2202 aaKnown RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 ATRXP46100 2492 aa11.69□□□□□ -0.54
CBX3-205ENST00000462165 DSPP15924 2871 aaKnown RBP11.69□□□□□ -0.54
CBX3-205ENST00000462165 VWA3AA6NCI4 1184 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 ANKRD63C9JTQ0 380 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 KHNYNO15037 678 aaKnown RBP11.68□□□□□ -0.54
CBX3-205ENST00000462165 NOL4O94818 638 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 USP17L7P0C7H9 530 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 TCF3P15923 654 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 IFNAR2P48551 515 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 NR1H3Q13133 447 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 PSMD2Q13200 908 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 SDHAF4Q5VUM1 108 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 ARL6IP4Q66PJ3 421 aaKnown RBP11.68□□□□□ -0.54
CBX3-205ENST00000462165 ADALQ6DHV7 355 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 SLFN12LQ6IEE8 588 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 RASSF3Q86WH2 238 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 GPBP1Q86WP2 473 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 TSTD1Q8NFU3 115 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 GATA6Q92908 595 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 ZNF560Q96MR9 790 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 ABCB6Q9NP58 842 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 WNT6Q9Y6F9 365 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 STYXL1Q9Y6J8 313 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 IGF2RP11717 2491 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 PI4KAP42356 2102 aa11.68□□□□□ -0.54
CBX3-205ENST00000462165 CEP192Q8TEP8 1941 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 TRAV19A0A0A6YYK7 116 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 PCNX2A6NKB5 2137 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 TOP3BO95985 862 aaKnown RBP11.67□□□□□ -0.54
CBX3-205ENST00000462165 CKMP06732 381 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 C7P10643 843 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 SPINK2P20155 84 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 PNPLA4P41247 253 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 RPL10AP62906 217 aaKnown RBP11.67□□□□□ -0.54
CBX3-205ENST00000462165 COL9A2Q14055 689 aaPredicted RBP11.67□□□□□ -0.54
CBX3-205ENST00000462165 DDR2Q16832 855 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 CRELD2Q6UXH1 353 aaPredicted RBP11.67□□□□□ -0.54
CBX3-205ENST00000462165 CYP2U1Q7Z449 544 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 NT5DC4Q86YG4 428 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 EFCAB13Q8IY85 973 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 PDCL2Q8N4E4 241 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 USP33Q8TEY7 942 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 LRRC15Q8TF66 581 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 CNOT6LQ96LI5 555 aaKnown RBP11.67□□□□□ -0.54
CBX3-205ENST00000462165 AK8Q96MA6 479 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 SLC22A12Q96S37 553 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 CYP2S1Q96SQ9 504 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 ACBD6Q9BR61 282 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 SCNM1Q9BWG6 230 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 TPSD1Q9BZJ3 242 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 ST6GALNAC4Q9H4F1 302 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 TRPC7Q9HCX4 862 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 BLOC1S4Q9NUP1 217 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 AGO2Q9UKV8 859 aaKnown RBP11.67□□□□□ -0.54
CBX3-205ENST00000462165 INVSQ9Y283 1065 aa11.67□□□□□ -0.54
CBX3-205ENST00000462165 PATE3B3GLJ2 98 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms