RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 DCUN1D2Q6PH85 259 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 TTC7BQ86TV6 843 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 PPIL6Q8IXY8 311 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 NAT8LQ8N9F0 302 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 DTX3LQ8TDB6 740 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 RMDN3Q96TC7 470 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 PDCD2LQ9BRP1 358 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 POLR3FQ9H1D9 316 aaPredicted RBP19.36■□□□□ 0.69
HPS3-204ENST00000462030 PIDD1Q9HB75 910 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 FETUBQ9UGM5 382 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 AGO2Q9UKV8 859 aaKnown RBP19.36■□□□□ 0.69
HPS3-204ENST00000462030 CAPN9O14815 690 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 SMIM24O75264 130 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 TMEM63AO94886 807 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 CALRP27797 417 aaKnown RBP19.36■□□□□ 0.69
HPS3-204ENST00000462030 PTPN7P35236 360 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 OTUD4Q01804 1114 aaKnown RBP19.36■□□□□ 0.69
HPS3-204ENST00000462030 GHRHRQ02643 423 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 KLHL38Q2WGJ6 581 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 OR5B17Q8NGF7 314 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 ACTL9Q8TC94 416 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 SCG3Q8WXD2 468 aaKnown RBP19.36■□□□□ 0.69
HPS3-204ENST00000462030 TSC22D3Q99576 134 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 TMEM39BQ9GZU3 492 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 ZNF70Q9UC06 446 aaPredicted RBP19.36■□□□□ 0.69
HPS3-204ENST00000462030 PCDHA10Q9Y5I2 948 aa19.36■□□□□ 0.69
HPS3-204ENST00000462030 AHCYL1O43865 530 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 TBX10O75333 385 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 PSMG1O95456 288 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 CDK16Q00536 496 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 SP4Q02446 784 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 ZBTB16Q05516 673 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 RCN2Q14257 317 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 SMTNL2Q2TAL5 461 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 BBS9Q3SYG4 887 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 ZC3H12AQ5D1E8 599 aaKnown RBP19.35■□□□□ 0.69
HPS3-204ENST00000462030 TEKT4Q8WW24 435 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 ZNF341Q9BYN7 854 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 GINM1Q9NU53 330 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 RBAKQ9NYW8 714 aaPredicted RBP19.35■□□□□ 0.69
HPS3-204ENST00000462030 SEPT9Q9UHD8 586 aaPredicted RBP19.35■□□□□ 0.69
HPS3-204ENST00000462030 CNTN6Q9UQ52 1028 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 LPXNO60711 386 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 MMP10P09238 476 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 NEFHP12036 1026 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 INHBEP58166 350 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 IRGCQ6NXR0 463 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 LRRC74BQ6ZQY2 392 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 SCYL3Q8IZE3 742 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 MCUR1Q96AQ8 359 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 FAM111AQ96PZ2 611 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 SH3GL3Q99963 347 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 PDLIM7Q9NR12 457 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 PXMP2Q9NR77 195 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 TAS2R1Q9NYW7 299 aa19.35■□□□□ 0.69
HPS3-204ENST00000462030 C3orf70A6NLC5 250 aaPredicted RBP19.34■□□□□ 0.69
HPS3-204ENST00000462030 GNAT1P11488 350 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 BGNP21810 368 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 BRD2P25440 801 aaKnown RBP19.34■□□□□ 0.69
HPS3-204ENST00000462030 RPL22P35268 128 aaKnown RBP19.34■□□□□ 0.69
HPS3-204ENST00000462030 CYP4A22Q5TCH4 519 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 PCGF5Q86SE9 256 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 PALM2Q8IXS6 379 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 VPS52Q8N1B4 723 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 TTC17Q96AE7 1141 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 SERAC1Q96JX3 654 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 LRCH1Q9Y2L9 728 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 ASB3Q9Y575 518 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 DLDP09622 509 aaKnown RBP19.34■□□□□ 0.69
HPS3-204ENST00000462030 SPDYE2Q495Y8 402 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 SEZ6Q53EL9 994 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 RNF220Q5VTB9 566 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 SWSAP1Q6NVH7 229 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 NLGN1Q8N2Q7 840 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 PHC3Q8NDX5 983 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 ZWILCHQ9H900 591 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 ARMCX1Q9P291 453 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 AGTPBP1Q9UPW5 1226 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 CHMP2BQ9UQN3 213 aa19.34■□□□□ 0.69
HPS3-204ENST00000462030 E7ESA3 106 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 DNAJC6O75061 913 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 DGAT1O75907 488 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 CALB1P05937 261 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 ETV4P43268 484 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 ZNF132P52740 706 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 NRLP54845 237 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 SLC34A1Q06495 639 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 PRKD1Q15139 912 aaPredicted RBP19.33■□□□□ 0.69
HPS3-204ENST00000462030 ZNF394Q53GI3 561 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 KCNT1Q5JUK3 1230 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 SLC30A9Q6PML9 568 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 IGDCC3Q8IVU1 814 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 MCPH1Q8NEM0 835 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 ALKBH8Q96BT7 664 aaKnown RBP19.33■□□□□ 0.69
HPS3-204ENST00000462030 DDX56Q9NY93 547 aaKnown RBP19.33■□□□□ 0.69
HPS3-204ENST00000462030 KIAA1217Q5T5P2 1943 aa19.33■□□□□ 0.69
HPS3-204ENST00000462030 NDC80O14777 642 aa19.33■□□□□ 0.68
HPS3-204ENST00000462030 MT-ND3P03897 115 aa19.33■□□□□ 0.68
HPS3-204ENST00000462030 DHRS4L1P0CG22 281 aa19.33■□□□□ 0.68
HPS3-204ENST00000462030 ESRRAP11474 423 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms