RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TAF12Q16514 161 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 KNOP1Q1ED39 458 aaKnown RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 FOXD4L6Q3SYB3 417 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 LMBRD2Q68DH5 695 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 ZC3H14Q6PJT7 736 aaKnown RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 FOXD4L3Q6VB84 417 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 MON1AQ86VX9 555 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 YAF2Q8IY57 180 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 ADGRF2Q8IZF7 708 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 CMTM8Q8IZV2 173 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 CELF5Q8N6W0 485 aaKnown RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 ZBTB44Q8NCP5 570 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 GOLGA5Q8TBA6 731 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 KBTBD7Q8WVZ9 684 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 FAM3CQ92520 227 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 TRMT2BQ96GJ1 504 aaKnown RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 GCNAQ96QF7 691 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 PI4K2AQ9BTU6 479 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 FAM126AQ9BYI3 521 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 IRX2Q9BZI1 471 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 GZF1Q9H116 711 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 USP25Q9UHP3 1055 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 SERTAD1Q9UHV2 236 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 GTF3C4Q9UKN8 822 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 CDH9Q9ULB4 789 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 ZDHHC9Q9Y397 364 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 R3HCC1Q9Y3T6 440 aaKnown RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 R4GN57 208 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 EP300Q09472 2414 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-207ENST00000461798 DPYSL4O14531 572 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 CLIC2O15247 247 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 TACC1O75410 805 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 PRAMEF12O95522 483 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 CHRNB1P11230 501 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 ACAT1P24752 427 aaKnown RBP9.81□□□□□ -0.84
BRCA1-207ENST00000461798 CYP2F1P24903 491 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 LMO2P25791 158 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 ATICP31939 592 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 AFMP43652 599 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 CLDN10P78369 228 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 CYP4F8P98187 520 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 CSTF1Q05048 431 aaKnown RBP9.81□□□□□ -0.84
BRCA1-207ENST00000461798 STK4Q13043 487 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 MTAPQ13126 283 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 ZNF268Q14587 947 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-207ENST00000461798 MAPRE1Q15691 268 aaKnown RBP9.81□□□□□ -0.84
BRCA1-207ENST00000461798 DDR2Q16832 855 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 VSTM1Q6UX27 236 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 C4orf50Q6ZRC1 276 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 RALGPS2Q86X27 583 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-207ENST00000461798 SLC9A9Q8IVB4 645 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 NELFCDQ8IXH7 590 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 CEP57L1Q8IYX8 460 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 ADSSL1Q8N142 457 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 SUMF1Q8NBK3 374 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 RDH13Q8NBN7 331 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 BPIFB1Q8TDL5 484 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 CSGALNACT1Q8TDX6 532 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 NOC3LQ8WTT2 800 aaKnown RBP9.81□□□□□ -0.84
BRCA1-207ENST00000461798 ZNF516Q92618 1163 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 PAGE5Q96GU1 130 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 CGRRF1Q99675 332 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 FAM83CQ9BQN1 747 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 LMAN1LQ9HAT1 526 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 SLC39A2Q9NP94 309 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 PRMT8Q9NR22 394 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-207ENST00000461798 DMAC2Q9NW81 257 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 THG1LQ9NWX6 298 aaKnown RBP9.81□□□□□ -0.84
BRCA1-207ENST00000461798 UXTQ9UBK9 157 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-207ENST00000461798 LHX6Q9UPM6 363 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 HPSEQ9Y251 543 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 PCDHGA2Q9Y5H1 932 aa9.81□□□□□ -0.84
BRCA1-207ENST00000461798 COL4A3Q01955 1670 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 TSC2P49815 1807 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 SLC38A8A6NNN8 435 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 LILRB5O75023 590 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 ATP2C2O75185 946 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 TDGF1P13385 188 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 TNNI1P19237 187 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 CCNE1P24864 410 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 GPR15P49685 360 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 CYP2J2P51589 502 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 CDR1P51861 262 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 AP3M2P53677 418 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 DGKKQ5KSL6 1271 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 SPATA2LQ8IUW3 424 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-207ENST00000461798 GPIHBP1Q8IV16 184 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 SYNPOQ8N3V7 929 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 SPRYD3Q8NCJ5 442 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 KIAA0895Q8NCT3 520 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 MYCBPAPQ8TBZ2 947 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 MRPS31Q92665 395 aaKnown RBP9.8□□□□□ -0.84
BRCA1-207ENST00000461798 USP13Q92995 863 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-207ENST00000461798 CCDC127Q96BQ5 260 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 SPATA17Q96L03 361 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 FNBP1Q96RU3 617 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 SYT15Q9BQS2 421 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 XYLT2Q9H1B5 865 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 VRTNQ9H8Y1 702 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 KIF9Q9HAQ2 790 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms