RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 SMARCB1Q12824 385 aa16.61■□□□□ 0.25
NUP50-213ENST00000461437 NFE2Q16621 373 aaPredicted RBP16.61■□□□□ 0.25
NUP50-213ENST00000461437 WDR44Q5JSH3 913 aa16.61■□□□□ 0.25
NUP50-213ENST00000461437 TXNDC11Q6PKC3 985 aa16.61■□□□□ 0.25
NUP50-213ENST00000461437 LIMS2Q7Z4I7 341 aa16.61■□□□□ 0.25
NUP50-213ENST00000461437 SPATA2LQ8IUW3 424 aaPredicted RBP16.61■□□□□ 0.25
NUP50-213ENST00000461437 ZNF687Q8N1G0 1237 aa16.61■□□□□ 0.25
NUP50-213ENST00000461437 FSIP1Q8NA03 581 aa16.61■□□□□ 0.25
NUP50-213ENST00000461437 TTC16Q8NEE8 873 aa16.61■□□□□ 0.25
NUP50-213ENST00000461437 FAM3CQ92520 227 aa16.61■□□□□ 0.25
NUP50-213ENST00000461437 DPEP3Q9H4B8 488 aa16.61■□□□□ 0.25
NUP50-213ENST00000461437 RBM12Q9NTZ6 932 aaKnown RBP16.61■□□□□ 0.25
NUP50-213ENST00000461437 LRRIQ3A6PVS8 624 aaPredicted RBP16.6■□□□□ 0.25
NUP50-213ENST00000461437 CLSTN1O94985 981 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 BDNFP23560 247 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 SYKP43405 635 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 RAP1GAPP47736 663 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 LHX1P48742 406 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 DLG4P78352 724 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 CYP27A1Q02318 531 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 CSTF1Q05048 431 aaKnown RBP16.6■□□□□ 0.25
NUP50-213ENST00000461437 FCHO2Q0JRZ9 810 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 MTAPQ13126 283 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 MDH1BQ5I0G3 518 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 TRIM68Q6AZZ1 485 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 FAM171BQ6P995 826 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 C12orf56Q8IXR9 622 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 CSGALNACT1Q8TDX6 532 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 CLDN23Q96B33 292 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 KCTD10Q9H3F6 313 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 TRPC7Q9HCX4 862 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.6■□□□□ 0.25
NUP50-213ENST00000461437 NXF1Q9UBU9 619 aaKnown RBP16.6■□□□□ 0.25
NUP50-213ENST00000461437 MAPK8IP1Q9UQF2 711 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 MYOFQ9NZM1 2061 aa16.6■□□□□ 0.25
NUP50-213ENST00000461437 MYO16Q9Y6X6 1858 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 CHADO15335 359 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 LAMTOR5O43504 91 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 FGF19O95750 216 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 RPN1P04843 607 aaKnown RBP16.59■□□□□ 0.25
NUP50-213ENST00000461437 WARSP23381 471 aaKnown RBP16.59■□□□□ 0.25
NUP50-213ENST00000461437 PCSK1P29120 753 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 HOXC13P31276 330 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 KPNA1P52294 538 aaPredicted RBP16.59■□□□□ 0.25
NUP50-213ENST00000461437 CACNA2D1P54289 1103 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 BIRC3Q13489 604 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 WDR72Q3MJ13 1102 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 TDRD10Q5VZ19 366 aaKnown RBP16.59■□□□□ 0.25
NUP50-213ENST00000461437 SCARA5Q6ZMJ2 495 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 CMTM8Q8IZV2 173 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 OR6B3Q8NGW1 331 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 BPIFB1Q8TDL5 484 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 USP13Q92995 863 aaPredicted RBP16.59■□□□□ 0.25
NUP50-213ENST00000461437 SLC22A12Q96S37 553 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 OSBPL6Q9BZF3 934 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 SMYD3Q9H7B4 428 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 LMAN1LQ9HAT1 526 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 CDH9Q9ULB4 789 aa16.59■□□□□ 0.25
NUP50-213ENST00000461437 EP300Q09472 2414 aaPredicted RBP16.58■□□□□ 0.25
NUP50-213ENST00000461437 CLDN5O00501 218 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 PHACTR2O75167 634 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 NOL4O94818 638 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 CSH1P0DML2 217 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 CSH2P0DML3 217 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 CDH8P55286 799 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 USP46P62068 366 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 RPL10AP62906 217 aaKnown RBP16.58■□□□□ 0.24
NUP50-213ENST00000461437 TNNC1P63316 161 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 TRPC3Q13507 836 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 DPH6Q7L8W6 267 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 ADSSL1Q8N142 457 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 E2F7Q96AV8 911 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 PCED1BQ96HM7 432 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 CYP2S1Q96SQ9 504 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 XYLT2Q9H1B5 865 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 SNX25Q9H3E2 840 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 TMEM30AQ9NV96 361 aa16.58■□□□□ 0.24
NUP50-213ENST00000461437 MAGEC2Q9UBF1 373 aaPredicted RBP16.58■□□□□ 0.24
NUP50-213ENST00000461437 MRPS17Q9Y2R5 130 aaKnown RBP16.58■□□□□ 0.24
NUP50-213ENST00000461437 SPECC1L-ADORA2AF8WAN1 911 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 MAN2B1O00754 1011 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 VNN1O95497 513 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 NR3C1P04150 777 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 GNL1P36915 607 aaPredicted RBP16.57■□□□□ 0.24
NUP50-213ENST00000461437 AVPR1AP37288 418 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 GRIK1P39086 918 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 SNRPFP62306 86 aaKnown RBP16.57■□□□□ 0.24
NUP50-213ENST00000461437 ORC1Q13415 861 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 GAS6Q14393 721 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 PON2Q15165 354 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 CFAP221Q4G0U5 840 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 ARHGAP29Q52LW3 1261 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 CEP135Q66GS9 1140 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 KRBA2Q6ZNG9 492 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 Q6ZS52 159 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 CELF5Q8N6W0 485 aaKnown RBP16.57■□□□□ 0.24
NUP50-213ENST00000461437 PARD3BQ8TEW8 1205 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 MRPS31Q92665 395 aaKnown RBP16.57■□□□□ 0.24
NUP50-213ENST00000461437 NELL2Q99435 816 aa16.57■□□□□ 0.24
NUP50-213ENST00000461437 SDCBP2Q9H190 292 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms