RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 FAM171BQ6P995 826 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 FBXO38Q6PIJ6 1188 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 LRRTM3Q86VH5 581 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 ELMOD1Q8N336 334 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 ANKRD20A12PQ8NF67 263 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 FAM200AQ8TCP9 573 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 SMG7Q92540 1137 aaKnown RBP11.8□□□□□ -0.52
APTX-209ENST00000460940 NT5C1BQ96P26 610 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 APOL5Q9BWW9 433 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 SDCBP2Q9H190 292 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 KCND1Q9NSA2 647 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 SAMSN1Q9NSI8 373 aaKnown RBP11.8□□□□□ -0.52
APTX-209ENST00000460940 TTC28Q96AY4 2481 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 KIF2AO00139 706 aaPredicted RBP11.8□□□□□ -0.52
APTX-209ENST00000460940 BMP1P13497 986 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 LMO2P25791 158 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 CDH8P55286 799 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 DUSP4Q13115 394 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 CUL2Q13617 745 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 SPATA2LQ8IUW3 424 aaPredicted RBP11.8□□□□□ -0.52
APTX-209ENST00000460940 SPC24Q8NBT2 197 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 ATAD1Q8NBU5 361 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 B3GALNT2Q8NCR0 500 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 MYCBPAPQ8TBZ2 947 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 TUBGCP2Q9BSJ2 902 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 PIDD1Q9HB75 910 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 CRTAC1Q9NQ79 661 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 ABI2Q9NYB9 513 aaPredicted RBP11.8□□□□□ -0.52
APTX-209ENST00000460940 GCNT4Q9P109 453 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 CCL16O15467 120 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 HCRTO43612 131 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 ATP8B3O60423 1300 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 CLUHO75153 1309 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 CILPO75339 1184 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 PDGFRBP09619 1106 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 WEE2P0C1S8 567 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 IL9P15248 144 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 H2AFXP16104 143 aaPredicted RBP11.79□□□□□ -0.52
APTX-209ENST00000460940 PTPN1P18031 435 aaKnown RBP11.79□□□□□ -0.52
APTX-209ENST00000460940 MAGEA11P43364 429 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 TNNT3P45378 269 aaPredicted RBP11.79□□□□□ -0.52
APTX-209ENST00000460940 ALDH1A3P47895 512 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 EPHB3P54753 998 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 PSMC1P62191 440 aaKnown RBP11.79□□□□□ -0.52
APTX-209ENST00000460940 VWA3BQ502W6 1294 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 SMYD5Q6GMV2 418 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 GBP6Q6ZN66 633 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 AOPEPQ8N6M6 819 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 LEMD2Q8NC56 503 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 EHBP1Q8NDI1 1231 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 LMO3Q8TAP4 145 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 MYLPFQ96A32 169 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 ELMO3Q96BJ8 720 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 FAM81BQ96LP2 452 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 PHF7Q9BWX1 381 aaPredicted RBP11.79□□□□□ -0.52
APTX-209ENST00000460940 INTS2Q9H0H0 1204 aaKnown RBP11.79□□□□□ -0.52
APTX-209ENST00000460940 NDST4Q9H3R1 872 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 WDR6Q9NNW5 1121 aaKnown RBP11.79□□□□□ -0.52
APTX-209ENST00000460940 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.79□□□□□ -0.522e-7■■■■■ 86.5
APTX-209ENST00000460940 TMLHEQ9NVH6 421 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 FANCLQ9NW38 375 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 GTF3C4Q9UKN8 822 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 ASB3Q9Y575 518 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 NME7Q9Y5B8 376 aa11.79□□□□□ -0.52
APTX-209ENST00000460940 MYBPHLA2RUH7 354 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 LRRN2O75325 713 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 HAPLN1P10915 354 aaPredicted RBP11.78□□□□□ -0.52
APTX-209ENST00000460940 PSEN1P49768 467 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 ZNF165P49910 485 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 NDST1P52848 882 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 RPL10AP62906 217 aaKnown RBP11.78□□□□□ -0.52
APTX-209ENST00000460940 TPM4P67936 248 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 GCNT1Q02742 428 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 TWF1Q12792 350 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 NAA30Q147X3 362 aaPredicted RBP11.78□□□□□ -0.52
APTX-209ENST00000460940 VEPH1Q14D04 833 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 NCAPHQ15003 741 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 MDH1BQ5I0G3 518 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 IQCEQ6IPM2 695 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 VSTM1Q6UX27 236 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 NYAP1Q6ZVC0 841 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 ITIH5Q86UX2 942 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 CRYBG2Q8N1P7 616 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 CEP295NLQ96MC4 621 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 SEPT5Q99719 369 aaPredicted RBP11.78□□□□□ -0.52
APTX-209ENST00000460940 NT5C1AQ9BXI3 368 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 CRISPLD1Q9H336 500 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 AVENQ9NQS1 362 aaPredicted RBP11.78□□□□□ -0.52
APTX-209ENST00000460940 CISHQ9NSE2 258 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 ATP2C2O75185 946 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 SLU7O95391 586 aaKnown RBP11.78□□□□□ -0.52
APTX-209ENST00000460940 ZNF18P17022 549 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 CD58P19256 250 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 KRT31Q15323 416 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 EXOC3L4Q17RC7 722 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 MGAT5BQ3V5L5 792 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 HSP90AA4PQ58FG1 418 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 MIIPQ5JXC2 388 aa11.78□□□□□ -0.52
APTX-209ENST00000460940 ENOSF1Q7L5Y1 443 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms