RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 AVILO75366 819 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 ZMPSTE24O75844 475 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 ASLP04424 464 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 ITGA2BP08514 1039 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 ASPHQ12797 758 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 GRAPQ13588 217 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 GK3PQ14409 553 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 SV2AQ7L0J3 742 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 HAUS6Q7Z4H7 955 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 NCAPG2Q86XI2 1143 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 SMC1BQ8NDV3 1235 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 GRAPLQ8TC17 118 aaPredicted RBP12.27□□□□□ -0.45
CPSF3-202ENST00000460593 ZNF398Q8TD17 642 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 PPP2R3CQ969Q6 453 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 ZNF577Q9BSK1 485 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 STRA6Q9BX79 667 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 TUFT1Q9NNX1 390 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 RAB20Q9NX57 234 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 LARSQ9P2J5 1176 aaKnown RBP12.27□□□□□ -0.45
CPSF3-202ENST00000460593 POLLQ9UGP5 575 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 SLC4A7Q9Y6M7 1214 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 COMMD3-BMI1R4GMX3 469 aa12.27□□□□□ -0.45
CPSF3-202ENST00000460593 A8MXQ7 604 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 TMEM63AO94886 807 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 RAP1GDS1P52306 607 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 SLC18A1P54219 525 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 PTK7Q13308 1070 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 MAMLD1Q13495 774 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 KRT39Q6A163 491 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 RBM44Q6ZP01 1051 aaKnown RBP12.26□□□□□ -0.45
CPSF3-202ENST00000460593 SESTD1Q86VW0 696 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 TMPRSS6Q8IU80 811 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 LRRN4Q8WUT4 740 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 GCNAQ96QF7 691 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 TRIM56Q9BRZ2 755 aaKnown RBP12.26□□□□□ -0.45
CPSF3-202ENST00000460593 NYXQ9GZU5 481 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 SLC24A2Q9UI40 661 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 SPECC1L-ADORA2AF8WAN1 911 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 DNAJC6O75061 913 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 TM7SF2O76062 418 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 GALK1P51570 392 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 TMPRSS15P98073 1019 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 BST1Q10588 318 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 MED21Q13503 144 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 BMPR2Q13873 1038 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 KCNT1Q5JUK3 1230 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 TCHHL1Q5QJ38 904 aaPredicted RBP12.26□□□□□ -0.45
CPSF3-202ENST00000460593 ADGRD1Q6QNK2 874 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 LCA5Q86VQ0 697 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 ARHGAP18Q8N392 663 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 CERS5Q8N5B7 392 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 DTNBP1Q96EV8 351 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 ACCSQ96QU6 501 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 VPS11Q9H270 941 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 SEL1LQ9UBV2 794 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 AK5Q9Y6K8 562 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 GAKO14976 1311 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 CAPN14A8MX76 684 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 NDUFB10O96000 172 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 CIITAP33076 1130 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 ETV4P43268 484 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 PSMC5P62195 406 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 JAG1P78504 1218 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 TMED1Q13445 227 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 KRT72Q14CN4 511 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 TRIP10Q15642 601 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 KBTBD12Q3ZCT8 623 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 MMEL1Q495T6 779 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 SPDYAQ5MJ70 313 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 NET1Q7Z628 596 aaPredicted RBP12.26□□□□□ -0.45
CPSF3-202ENST00000460593 PDSS2Q86YH6 399 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.26□□□□□ -0.45
CPSF3-202ENST00000460593 GDPD5Q8WTR4 605 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 CPT1BQ92523 772 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 SLITRK1Q96PX8 696 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 IWS1Q96ST2 819 aa12.26□□□□□ -0.45
CPSF3-202ENST00000460593 SLC26A4O43511 780 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 MORF4L2Q15014 288 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 GRAMD1BQ3KR37 738 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 C6orf163Q5TEZ5 329 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 PLA2G4FQ68DD2 849 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 DENND5BQ6ZUT9 1274 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 CTAGE3PQ8IX95 158 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 ARHGAP24Q8N264 748 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 FBXL13Q8NEE6 735 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 PLEKHG4BQ96PX9 1271 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.25□□□□□ -0.45
CPSF3-202ENST00000460593 A0A088AWK7 358 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 ATP2A1O14983 1001 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 UGT1A9O60656 530 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 VCLP18206 1134 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 SERPINB6P35237 376 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 BASP1P80723 227 aaKnown RBP12.25□□□□□ -0.45
CPSF3-202ENST00000460593 PDK3Q15120 406 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 DLGAP5Q15398 846 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 CHI3L2Q15782 390 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 KATNAL2Q8IYT4 538 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 CEP70Q8NHQ1 597 aa12.25□□□□□ -0.45
CPSF3-202ENST00000460593 LENG1Q96BZ8 264 aaPredicted RBP12.25□□□□□ -0.45
CPSF3-202ENST00000460593 TUBB6Q9BUF5 446 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms