RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 RIBC1Q8N443 379 aaPredicted RBP20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 CEP120Q8N960 986 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 PPP1R16BQ96T49 567 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 MIPEPQ99797 713 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 XPO7Q9UIA9 1087 aaKnown RBP20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 CCDC195A0A1B0GUA6 201 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 GJB1P08034 283 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 COL4A5P29400 1685 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 YWHAGP61981 247 aaKnown RBP eCLIP20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 CXCL9Q07325 125 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 DSTYKQ6XUX3 929 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 SLC7A3Q8WY07 619 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 LPAR1Q92633 364 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 OSBPL1AQ9BXW6 950 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 C17orf75Q9HAS0 396 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 ARL8BQ9NVJ2 186 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 KANSL3Q9P2N6 904 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 TBC1D12O60347 775 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 STAM2O75886 525 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 SERPINB3P29508 390 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 CNTN2Q02246 1040 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 CAPRIN2Q6IMN6 1127 aaKnown RBP20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 ABHD15Q6UXT9 468 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 CTAGE3PQ8IX95 158 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 LRRC71Q8N4P6 559 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 NSUN6Q8TEA1 469 aaKnown RBP20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 CGRRF1Q99675 332 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 ZNF302Q9NR11 478 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 ZNRF3Q9ULT6 936 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 CNTNAP2Q9UHC6 1331 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 CSDE1O75534 798 aaKnown RBP20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 GRAP2O75791 330 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 BGNP21810 368 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 SLC8A3P57103 927 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 TRPC3Q13507 836 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 CDO1Q16878 200 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 NBPF12Q5TAG4 269 aaPredicted RBP20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 MAB21L3Q8N8X9 362 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 TMEM35BQ8NCS4 154 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 CFAP36Q96G28 342 aa20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 TRIM56Q9BRZ2 755 aaKnown RBP20.54■□□□□ 0.88
CNEP1R1-203ENST00000458059 F5H423 210 aaPredicted RBP20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 KIF1CO43896 1103 aaKnown RBP20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 TPBGLP0DKB5 382 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 CALB2P22676 271 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 PTPN20Q4JDL3 420 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 KHDC1Q4VXA5 237 aaKnown RBP20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 XKR3Q5GH77 459 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 SH3PXD2AQ5TCZ1 1133 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 CLNKQ7Z7G1 428 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 RELL1Q8IUW5 271 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 SCYL3Q8IZE3 742 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 ARFGAP1Q8N6T3 406 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 ZNF395Q9H8N7 513 aaPredicted RBP20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 MYOZ2Q9NPC6 264 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 CYP39A1Q9NYL5 469 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 MARCOQ9UEW3 520 aaPredicted RBP20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 CYTH4Q9UIA0 394 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 KITP10721 976 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 PTDSS1P48651 473 aaKnown RBP20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 ARL4CP56559 192 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 AGGF1Q8N302 714 aaeCLIP20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 STK32AQ8WU08 396 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 GPRASP2Q96D09 838 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 MECRQ9BV79 373 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 PCDH9Q9HC56 1237 aa20.53■□□□□ 0.88
CNEP1R1-203ENST00000458059 A0A0B4J269 797 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 KRT3P12035 628 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 TBXAS1P24557 533 aaPredicted RBP20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 ELK3P41970 407 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 PSMC1P62191 440 aaKnown RBP20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 CCDC15Q0P6D6 951 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 ATP11CQ8NB49 1132 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 KCTD6Q8NC69 237 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 MANSC1Q9H8J5 431 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 LPXNO60711 386 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 LRCH4O75427 683 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 CALB1P05937 261 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 SUPT20HL2P0C7V6 817 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 CAPSQ13938 189 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 CCDC6Q16204 474 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 NBPF20Q3BBV1 942 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 SUPT20HL1Q3ZLR7 823 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 TRIM50Q86XT4 487 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 NIM1KQ8IY84 436 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 VCPIP1Q96JH7 1222 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 SERAC1Q96JX3 654 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 PGAP2Q9UHJ9 254 aa20.52■□□□□ 0.88
CNEP1R1-203ENST00000458059 MAGEB2O15479 319 aa20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 MT-ND3P03897 115 aa20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 TROVE2P10155 538 aaKnown RBP eCLIP20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 PYGBP11216 843 aa20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 SKIV2L2P42285 1042 aaKnown RBP20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 TGFB2P61812 414 aa20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 CLDN10P78369 228 aa20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 IRX4P78413 519 aa20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 TMEM132BQ14DG7 1078 aa20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 KBTBD12Q3ZCT8 623 aa20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 C1orf228Q6PIY5 440 aa20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 FAM83AQ86UY5 434 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms