RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CCL26Q9Y258 94 aa23.12■■□□□ 1.29
CPNE1-220ENST00000458038 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.11■■□□□ 1.29
CPNE1-220ENST00000458038 AKAP3O75969 853 aa23.11■■□□□ 1.29
CPNE1-220ENST00000458038 NOL4O94818 638 aa23.11■■□□□ 1.29
CPNE1-220ENST00000458038 MYO1EQ12965 1108 aa23.11■■□□□ 1.29
CPNE1-220ENST00000458038 SRSF5Q13243 272 aaKnown RBP23.11■■□□□ 1.29
CPNE1-220ENST00000458038 FSTL4Q6MZW2 842 aa23.11■■□□□ 1.29
CPNE1-220ENST00000458038 CACNA2D4Q7Z3S7 1137 aa23.11■■□□□ 1.29
CPNE1-220ENST00000458038 FSIP1Q8NA03 581 aa23.11■■□□□ 1.29
CPNE1-220ENST00000458038 CXorf38Q8TB03 319 aa23.11■■□□□ 1.29
CPNE1-220ENST00000458038 GAB3Q8WWW8 586 aa23.11■■□□□ 1.29
CPNE1-220ENST00000458038 CEP295NLQ96MC4 621 aa23.11■■□□□ 1.29
CPNE1-220ENST00000458038 CLIC6Q96NY7 704 aa23.11■■□□□ 1.29
CPNE1-220ENST00000458038 PANK4Q9NVE7 773 aa23.11■■□□□ 1.29
CPNE1-220ENST00000458038 TULP1O00294 542 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-220ENST00000458038 GABRDO14764 452 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 USP17L7P0C7H9 530 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 TMEM191BP0C7N4 346 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 CYP2F1P24903 491 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 STAT6P42226 847 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 MAGEA11P43364 429 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 FAM160A1Q05DH4 1040 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 SURF1Q15526 300 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 DDR2Q16832 855 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 SPATA2LQ8IUW3 424 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-220ENST00000458038 CPA6Q8N4T0 437 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 CCDC26Q8TAB7 109 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 ANKRD36BP1Q96IX9 119 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 PKMYT1Q99640 499 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 LRRC27Q9C0I9 530 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 GTF3C4Q9UKN8 822 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 SNX9Q9Y5X1 595 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 ANAPC1Q9H1A4 1944 aa23.1■■□□□ 1.29
CPNE1-220ENST00000458038 TRAV19A0A0A6YYK7 116 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 RPP40O75818 363 aaKnown RBP23.09■■□□□ 1.29
CPNE1-220ENST00000458038 KRT19P08727 400 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 PDE6CP51160 858 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 CASP5P51878 434 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 WNT7BP56706 349 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 SLC39A14Q15043 492 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 MAPRE1Q15691 268 aaKnown RBP23.09■■□□□ 1.29
CPNE1-220ENST00000458038 TRIM68Q6AZZ1 485 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 C4orf50Q6ZRC1 276 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 CCDC65Q8IXS2 484 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 ADGRF2Q8IZF7 708 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 GPD1LQ8N335 351 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 PDE11AQ9HCR9 933 aa23.09■■□□□ 1.29
CPNE1-220ENST00000458038 CHD8Q9HCK8 2581 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 OTOL1A6NHN0 477 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-220ENST00000458038 ADRB1P08588 477 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 GPR15P49685 360 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 LIMK1P53667 647 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 RESTQ13127 1097 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 NR1H3Q13133 447 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 MTF1Q14872 753 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 FAM171BQ6P995 826 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 ZSWIM2Q8NEG5 633 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 OSCP1Q8WVF1 389 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 ATP2A3Q93084 1043 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 P2RY13Q9BPV8 354 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 CBWD1Q9BRT8 395 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 SIX4Q9UIU6 781 aa23.08■■□□□ 1.29
CPNE1-220ENST00000458038 GOLGA8IPA6NC78 632 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 ZNF233A6NK53 670 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 GOLGA8JA6NMD2 632 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 TNNC2P02585 160 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 ZNF806P0C7X5 589 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 CCDC192P0DO97 292 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 ARSAP15289 507 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 PFKLP17858 780 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 SYT1P21579 422 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 ACAT1P24752 427 aaKnown RBP23.07■■□□□ 1.28
CPNE1-220ENST00000458038 RAP1GAPP47736 663 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 GALK1P51570 392 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 DUOXA2Q1HG44 320 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 SOWAHAQ2M3V2 549 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 SDHAF4Q5VUM1 108 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 VSTM1Q6UX27 236 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 LIMS2Q7Z4I7 341 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 CHFRQ96EP1 664 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 MTMR12Q9C0I1 747 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 ZSCAN16Q9H4T2 348 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-220ENST00000458038 PCIF1Q9H4Z3 704 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 ECT2Q9H8V3 914 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 KIAA1586Q9HCI6 787 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 INTS13Q9NVM9 706 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 DUS2Q9NX74 493 aaKnown RBP23.07■■□□□ 1.28
CPNE1-220ENST00000458038 EHD2Q9NZN4 543 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 PCDHGA5Q9Y5G8 931 aa23.07■■□□□ 1.28
CPNE1-220ENST00000458038 RNF40O75150 1001 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 TADA3O75528 432 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 CKMP06732 381 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 TCF3P15923 654 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 GJA4P35212 333 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 IFNAR2P48551 515 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 CEBPZQ03701 1054 aaKnown RBP23.06■■□□□ 1.28
CPNE1-220ENST00000458038 ZNF77Q15935 545 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 PPM1JQ5JR12 505 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 PKN3Q6P5Z2 889 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 NOC3LQ8WTT2 800 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms