RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 TWNKQ96RR1 684 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 HNRNPABQ99729 332 aaKnown RBP9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 ACBD6Q9BR61 282 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 NUP85Q9BW27 656 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 SLC4A5Q9BY07 1137 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 STK39Q9UEW8 545 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 CNOT8Q9UFF9 292 aaKnown RBP9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 PRKAG2Q9UGJ0 569 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 HMGXB4Q9UGU5 601 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 SALL4Q9UJQ4 1053 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 HYOU1Q9Y4L1 999 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 SAR1BQ9Y6B6 198 aa9.44□□□□□ -0.9
CDC42EP3-204ENST00000457889 LTBP2Q14767 1821 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 SF3B1O75533 1304 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 GOLGA8CPA6NN73 597 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 BUB1O43683 1085 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 URI1O94763 535 aaPredicted RBP9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 ABL1P00519 1130 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 FGFR1P11362 822 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 GPD2P43304 727 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 GABRB2P47870 512 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 AFF1P51825 1210 aaKnown RBP9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 AMPD2Q01433 879 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 PLCB3Q01970 1234 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 CKAP4Q07065 602 aaKnown RBP9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 BST2Q10589 180 aaKnown RBP9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 PTP4A2Q12974 167 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 PDCLQ13371 301 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 PPIGQ13427 754 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 ZNF268Q14587 947 aaPredicted RBP9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 PKDCCQ504Y2 493 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 TIGD5Q53EQ6 642 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 MEI1Q5TIA1 1274 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 WSCD1Q658N2 575 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 DNAJC24Q6P3W2 148 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 MMS22LQ6ZRQ5 1243 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 PEX26Q7Z412 305 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 DAAM2Q86T65 1068 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 ACOT1Q86TX2 421 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 PASD1Q8IV76 773 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 C1orf131Q8NDD1 294 aaKnown RBP9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 C3orf58Q8NDZ4 430 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 MNS1Q8NEH6 495 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 ZNF564Q8TBZ8 553 aaPredicted RBP9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 FNIP1Q8TF40 1166 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 CPA5Q8WXQ8 436 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 C18orf8Q96DM3 657 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 RPGRIP1Q96KN7 1286 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 HSFY1Q96LI6 401 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 CASD1Q96PB1 797 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 ZSWIM1Q9BR11 485 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 COLEC11Q9BWP8 271 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 SYNCQ9H7C4 482 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 CDC23Q9UJX2 597 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 TSPAN16Q9UKR8 245 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 SNX12Q9UMY4 172 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 TFR2Q9UP52 801 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 MRFAP1Q9Y605 127 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 TET1Q8NFU7 2136 aa9.43□□□□□ -0.9
CDC42EP3-204ENST00000457889 TRIM43BA6NCK2 446 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 MYO1FO00160 1098 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 FANCGO15287 622 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 BUB1BO60566 1050 aaPredicted RBP9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 OAZ2O95190 189 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 ALDH2P05091 517 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 DESP17661 470 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 PTPN1P18031 435 aaKnown RBP9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 RRM1P23921 792 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 PLA2G4AP47712 749 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 RPL34P49207 117 aaKnown RBP9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 TSPY1Q01534 308 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 ITIH3Q06033 890 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 SMARCB1Q12824 385 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 MAMLD1Q13495 774 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 ACAP1Q15027 740 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 RPS6KA1Q15418 735 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 GOLGA7BQ2TAP0 167 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 PPP1R26Q5T8A7 1209 aaPredicted RBP9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 OVOS1Q6IE37 1185 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 DENND1BQ6P3S1 775 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 ARCQ7LC44 396 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 DEFB128Q7Z7B8 93 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 CMTR2Q8IYT2 770 aaKnown RBP9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 UBL4BQ8N7F7 174 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 CEP112Q8N8E3 955 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 MYCBPAPQ8TBZ2 947 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 ZDHHC16Q969W1 377 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 TRIM43Q96BQ3 446 aaPredicted RBP9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 ARHGEF26Q96DR7 871 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 NCAPGQ9BPX3 1015 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 SYT15Q9BQS2 421 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 C11orf70Q9BRQ4 267 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 PLVAPQ9BX97 442 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 TLR10Q9BXR5 811 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 UBXN6Q9BZV1 441 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 ABCB6Q9NP58 842 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 PNPLA8Q9NP80 782 aa9.42□□□□□ -0.9
CDC42EP3-204ENST00000457889 IL23AQ9NPF7 189 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms