RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 TPM2P07951 284 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 PRKCSHP14314 528 aaPredicted RBP13.1□□□□□ -0.31
C9orf139-201ENST00000457302 CD58P19256 250 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 BDNFP23560 247 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 TBXAS1P24557 533 aaPredicted RBP13.1□□□□□ -0.31
C9orf139-201ENST00000457302 CDC25CP30307 473 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 NDST1P52848 882 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 MARSP56192 900 aaKnown RBP13.1□□□□□ -0.31
C9orf139-201ENST00000457302 TDGQ13569 410 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 MTMR3Q13615 1198 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 DDR2Q16832 855 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 CBWD6Q4V339 395 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 CBWD3Q5JTY5 395 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 CBWD5Q5RIA9 395 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 ACOT1Q86TX2 421 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 UBALD2Q8IYN6 164 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 CRYBG2Q8N1P7 616 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 FEZF2Q8TBJ5 459 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 ING5Q8WYH8 240 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 MYLPFQ96A32 169 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 ELMO3Q96BJ8 720 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 PCED1BQ96HM7 432 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 NT5C1BQ96P26 610 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 ELOVL4Q9GZR5 314 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 NAT10Q9H0A0 1025 aaKnown RBP13.1□□□□□ -0.31
C9orf139-201ENST00000457302 THAP9Q9H5L6 903 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 KCNK12Q9HB15 430 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 ZMYM5Q9UJ78 669 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 COQ4Q9Y3A0 265 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 ZNF638Q14966 1978 aaKnown RBP13.1□□□□□ -0.31
C9orf139-201ENST00000457302 DENND4AQ7Z401 1863 aa13.1□□□□□ -0.31
C9orf139-201ENST00000457302 PMM2O15305 246 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 HCRTO43612 131 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 GABRR2P28476 465 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 ASPAP45381 313 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 LRMPQ12912 555 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 STX1AQ16623 288 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 DPCR1Q3MIW9 517 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 TRIM59Q8IWR1 403 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 TTC9BQ8N6N2 239 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 EHBP1Q8NDI1 1231 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 ANKRD20A12PQ8NF67 263 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 EDAQ92838 391 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 SEMA4DQ92854 862 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 CNOT6LQ96LI5 555 aaKnown RBP13.09□□□□□ -0.31
C9orf139-201ENST00000457302 FAM81BQ96LP2 452 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 HEXIM2Q96MH2 286 aaKnown RBP13.09□□□□□ -0.31
C9orf139-201ENST00000457302 NOTCH4Q99466 2003 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 PKMYT1Q99640 499 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 LPIN3Q9BQK8 851 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 BCO2Q9BYV7 579 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 APOBEC3GQ9HC16 384 aaKnown RBP13.09□□□□□ -0.31
C9orf139-201ENST00000457302 CRTAC1Q9NQ79 661 aa13.09□□□□□ -0.31
C9orf139-201ENST00000457302 A0A1W2PRU2 124 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 SLC38A8A6NNN8 435 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 PES1O00541 588 aaKnown RBP13.08□□□□□ -0.32
C9orf139-201ENST00000457302 DPYSL4O14531 572 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 ASGR2P07307 311 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 EPHA5P54756 1037 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 SLC8A3P57103 927 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 ZXDAP98168 799 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 SKOR2Q2VWA4 1001 aaPredicted RBP13.08□□□□□ -0.32
C9orf139-201ENST00000457302 DENND5BQ6ZUT9 1274 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 GPR152Q8TDT2 470 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 MRPS31Q92665 395 aaKnown RBP13.08□□□□□ -0.32
C9orf139-201ENST00000457302 TATDN2Q93075 761 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 E2F7Q96AV8 911 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 TCEAL4Q96EI5 215 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 SPATA17Q96L03 361 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 B3GNT5Q9BYG0 378 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 DPEP3Q9H4B8 488 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 EPHX3Q9H6B9 360 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 ZFP14Q9HCL3 533 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 CISHQ9NSE2 258 aa13.08□□□□□ -0.32
C9orf139-201ENST00000457302 CILPO75339 1184 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 GJA1P17302 382 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 CEBPBP17676 345 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 ATF6P18850 670 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 CDK11BP21127 795 aaKnown RBP13.07□□□□□ -0.32
C9orf139-201ENST00000457302 INCA1Q0VD86 236 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 CUL2Q13617 745 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 TEAD2Q15562 447 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 SLC5A9Q2M3M2 681 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 ZNF394Q53GI3 561 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 PRSS36Q5K4E3 855 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 SDHAF4Q5VUM1 108 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 CAVIN1Q6NZI2 390 aaKnown RBP13.07□□□□□ -0.32
C9orf139-201ENST00000457302 GBP6Q6ZN66 633 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 RBM43Q6ZSC3 357 aaKnown RBP13.07□□□□□ -0.32
C9orf139-201ENST00000457302 NPAS3Q8IXF0 933 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 PPM1KQ8N3J5 372 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 SLC44A3Q8N4M1 653 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 ENOX1Q8TC92 643 aaKnown RBP13.07□□□□□ -0.32
C9orf139-201ENST00000457302 SMARCD1Q96GM5 515 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 TMEM176AQ96HP8 235 aa13.07□□□□□ -0.32
C9orf139-201ENST00000457302 C8orf48Q96LL4 319 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms