RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 UNC93AQ86WB7 457 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 CRYBG2Q8N1P7 616 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 AOPEPQ8N6M6 819 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 CCDC150Q8NCX0 1101 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 SLC7A14Q8TBB6 771 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 WHAMMQ8TF30 809 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 LPIN3Q9BQK8 851 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 SYT15Q9BQS2 421 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 CRACR2AQ9BSW2 395 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 NDST4Q9H3R1 872 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 DPEP3Q9H4B8 488 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 CYP4F11Q9HBI6 524 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 CD320Q9NPF0 282 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 CDH22Q9UJ99 828 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 SLC27A5Q9Y2P5 690 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 USP15Q9Y4E8 981 aaPredicted RBP10.73□□□□□ -0.69
ATG4A-206ENST00000457035 SMTNL1A8MU46 457 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 CILPO75339 1184 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 HAPLN1P10915 354 aaPredicted RBP10.72□□□□□ -0.69
ATG4A-206ENST00000457035 PRKCSHP14314 528 aaPredicted RBP10.72□□□□□ -0.69
ATG4A-206ENST00000457035 SLC9A1P19634 815 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 SSTR3P32745 418 aaPredicted RBP10.72□□□□□ -0.69
ATG4A-206ENST00000457035 NDST1P52848 882 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 PSMC1P62191 440 aaKnown RBP10.72□□□□□ -0.69
ATG4A-206ENST00000457035 LRMPQ12912 555 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 CAMK2BQ13554 666 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 CUL2Q13617 745 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 KRT31Q15323 416 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 SMAD2Q15796 467 aaKnown RBP10.72□□□□□ -0.69
ATG4A-206ENST00000457035 NFE2Q16621 373 aaPredicted RBP10.72□□□□□ -0.69
ATG4A-206ENST00000457035 TMEM31Q5JXX7 168 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 PPM1LQ5SGD2 360 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 ATAT1Q5SQI0 421 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 LIN9Q5TKA1 542 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 PHLDB3Q6NSJ2 640 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 CES5AQ6NT32 575 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 DPY19L2P1Q6NXN4 242 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 ELMSAN1Q6PJG2 1045 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 APTXQ7Z2E3 356 aaKnown RBP10.72□□□□□ -0.69
ATG4A-206ENST00000457035 TTC9BQ8N6N2 239 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 UBR7Q8N806 425 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 MYCBPAPQ8TBZ2 947 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 SPPL2BQ8TCT7 592 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 C2orf15Q8WU43 125 aaKnown RBP10.72□□□□□ -0.69
ATG4A-206ENST00000457035 TWNKQ96RR1 684 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 ARID3AQ99856 593 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 FAM124BQ9H5Z6 455 aaPredicted RBP10.72□□□□□ -0.69
ATG4A-206ENST00000457035 HMGXB4Q9UGU5 601 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 LIMA1Q9UHB6 759 aaKnown RBP10.72□□□□□ -0.69
ATG4A-206ENST00000457035 HCN4Q9Y3Q4 1203 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 PCDHB5Q9Y5E4 795 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 INSL5Q9Y5Q6 135 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 ANAPC1Q9H1A4 1944 aa10.72□□□□□ -0.69
ATG4A-206ENST00000457035 PRRG1O14668 218 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 CCL16O15467 120 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 CLSTN1O94985 981 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 CAVIN2O95810 425 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 POU2F2P09086 479 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 ATP1A3P13637 1013 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 CYP2F1P24903 491 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 PON1P27169 355 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 TUFMP49411 452 aaKnown RBP10.71□□□□□ -0.69
ATG4A-206ENST00000457035 KCNMA1Q12791 1236 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 MMRN1Q13201 1228 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 MAPRE1Q15691 268 aaKnown RBP10.71□□□□□ -0.69
ATG4A-206ENST00000457035 EXOC3L4Q17RC7 722 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 CFAP221Q4G0U5 840 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 TRIM65Q6PJ69 517 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 PAQR9Q6ZVX9 377 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 DENND4AQ7Z401 1863 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 ACOT1Q86TX2 421 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 ARHGEF19Q8IW93 802 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 B3GALNT2Q8NCR0 500 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 SMG7Q92540 1137 aaKnown RBP10.71□□□□□ -0.69
ATG4A-206ENST00000457035 KAT5Q92993 513 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 PCED1BQ96HM7 432 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 FUBP3Q96I24 572 aaKnown RBP eCLIP10.71□□□□□ -0.69
ATG4A-206ENST00000457035 NT5C1BQ96P26 610 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 ELOVL4Q9GZR5 314 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 INTS2Q9H0H0 1204 aaKnown RBP10.71□□□□□ -0.69
ATG4A-206ENST00000457035 VPS16Q9H269 839 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 CBX8Q9HC52 389 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 ABCB6Q9NP58 842 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 CISHQ9NSE2 258 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 ABI2Q9NYB9 513 aaPredicted RBP10.71□□□□□ -0.69
ATG4A-206ENST00000457035 TAB2Q9NYJ8 693 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 CEP72Q9P209 647 aa10.71□□□□□ -0.69
ATG4A-206ENST00000457035 DNMT3BQ9UBC3 853 aaKnown RBP10.71□□□□□ -0.69
ATG4A-206ENST00000457035 SOAT2O75908 522 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 CD58P19256 250 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 CDK11BP21127 795 aaKnown RBP10.7□□□□□ -0.7
ATG4A-206ENST00000457035 ACO1P21399 889 aaKnown RBP10.7□□□□□ -0.7
ATG4A-206ENST00000457035 TBXAS1P24557 533 aaPredicted RBP10.7□□□□□ -0.7
ATG4A-206ENST00000457035 MTHFRP42898 656 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 MAGEA11P43364 429 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 COPB1P53618 953 aaKnown RBP10.7□□□□□ -0.7
ATG4A-206ENST00000457035 RAD23BP54727 409 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 APBA1Q02410 837 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 GCNT1Q02742 428 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms