RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TMC8Q8IU68 726 aa24.72■■□□□ 1.55
CBX3-204ENST00000456948 SCN4BQ8IWT1 228 aa24.72■■□□□ 1.55
CBX3-204ENST00000456948 NELFBQ8WX92 580 aa24.72■■□□□ 1.55
CBX3-204ENST00000456948 MYLPFQ96A32 169 aa24.72■■□□□ 1.55
CBX3-204ENST00000456948 LRRC3Q9BY71 257 aa24.72■■□□□ 1.55
CBX3-204ENST00000456948 ARIH1Q9Y4X5 557 aaPredicted RBP24.72■■□□□ 1.55
CBX3-204ENST00000456948 TRIM66O15016 1216 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 ATP2C2O75185 946 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 MCCD1P59942 119 aaPredicted RBP24.71■■□□□ 1.55
CBX3-204ENST00000456948 PPP3CAQ08209 521 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 DCAF17Q5H9S7 520 aaPredicted RBP24.71■■□□□ 1.55
CBX3-204ENST00000456948 C1orf220Q5T0J3 134 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 FILIP1Q7Z7B0 1213 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 ZC3H3Q8IXZ2 948 aaKnown RBP24.71■■□□□ 1.55
CBX3-204ENST00000456948 TTC39CQ8N584 583 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 B3GALNT2Q8NCR0 500 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 SHKBP1Q8TBC3 707 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 FAXDC2Q96IV6 333 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 KXD1Q9BQD3 176 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 CYP3A43Q9HB55 503 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 SLC2A4RGQ9NR83 387 aa24.71■■□□□ 1.55
CBX3-204ENST00000456948 GNA14O95837 355 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 DDX6P26196 483 aaKnown RBP eCLIP24.7■■□□□ 1.54
CBX3-204ENST00000456948 PAK1Q13153 545 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 DDR2Q16832 855 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 CCDC40Q4G0X9 1142 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 MDH1BQ5I0G3 518 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 FAM78AQ5JUQ0 283 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 SCARA5Q6ZMJ2 495 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 FRMD5Q7Z6J6 570 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 UNC93AQ86WB7 457 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 FBXL13Q8NEE6 735 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 ZSCAN18Q8TBC5 510 aaPredicted RBP24.7■■□□□ 1.54
CBX3-204ENST00000456948 TAS1R2Q8TE23 839 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 PCED1BQ96HM7 432 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 SHDQ96IW2 340 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 ASB16Q96NS5 453 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 ELOVL4Q9GZR5 314 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 SMOC2Q9H3U7 446 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 SMYD3Q9H7B4 428 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 CRTAC1Q9NQ79 661 aa24.7■■□□□ 1.54
CBX3-204ENST00000456948 MAGED2Q9UNF1 606 aaPredicted RBP24.7■■□□□ 1.54
CBX3-204ENST00000456948 TRIM49BA6NDI0 452 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 SOBPA7XYQ1 873 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 PPP1R3GB7ZBB8 358 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 DPYSL4O14531 572 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 HCRTO43612 131 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 NARSO43776 548 aaKnown RBP24.69■■□□□ 1.54
CBX3-204ENST00000456948 CFHP08603 1231 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 GJA1P17302 382 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 BDNFP23560 247 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 PMS1P54277 932 aaKnown RBP24.69■■□□□ 1.54
CBX3-204ENST00000456948 CDH8P55286 799 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 NOP14P78316 857 aaKnown RBP24.69■■□□□ 1.54
CBX3-204ENST00000456948 CETN1Q12798 172 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 GPR152Q8TDT2 470 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 MRPS31Q92665 395 aaKnown RBP24.69■■□□□ 1.54
CBX3-204ENST00000456948 SPATA17Q96L03 361 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 TASP1Q9H6P5 420 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 RAB20Q9NX57 234 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 CTNND2Q9UQB3 1225 aa24.69■■□□□ 1.54
CBX3-204ENST00000456948 STK25O00506 426 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 MOSPD3O75425 235 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 GPR158Q5T848 1215 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 TANGO2Q6ICL3 276 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 GAREM2Q75VX8 874 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 YAF2Q8IY57 180 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 SIX5Q8N196 739 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 DEPDC1BQ8WUY9 529 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 TRMT2BQ96GJ1 504 aaKnown RBP24.68■■□□□ 1.54
CBX3-204ENST00000456948 PRRX2Q99811 253 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 MED10Q9BTT4 135 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 RPP25Q9BUL9 199 aaKnown RBP24.68■■□□□ 1.54
CBX3-204ENST00000456948 NIF3L1Q9GZT8 377 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 KCNH6Q9H252 994 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 TRPV4Q9HBA0 871 aa24.68■■□□□ 1.54
CBX3-204ENST00000456948 ZNF334Q9HCZ1 680 aaPredicted RBP24.68■■□□□ 1.54
CBX3-204ENST00000456948 SLC38A8A6NNN8 435 aa24.67■■□□□ 1.54
CBX3-204ENST00000456948 NOL4O94818 638 aa24.67■■□□□ 1.54
CBX3-204ENST00000456948 CD44P16070 742 aaKnown RBP24.67■■□□□ 1.54
CBX3-204ENST00000456948 RAP1GAPP47736 663 aa24.67■■□□□ 1.54
CBX3-204ENST00000456948 GPC5P78333 572 aa24.67■■□□□ 1.54
CBX3-204ENST00000456948 ST13P5Q8NFI4 369 aaPredicted RBP24.67■■□□□ 1.54
CBX3-204ENST00000456948 MYRFLQ96LU7 910 aa24.67■■□□□ 1.54
CBX3-204ENST00000456948 ZSWIM3Q96MP5 696 aa24.67■■□□□ 1.54
CBX3-204ENST00000456948 TRMT61BQ9BVS5 477 aaKnown RBP24.67■■□□□ 1.54
CBX3-204ENST00000456948 CLSTN2Q9H4D0 955 aa24.67■■□□□ 1.54
CBX3-204ENST00000456948 FAM124BQ9H5Z6 455 aaPredicted RBP24.67■■□□□ 1.54
CBX3-204ENST00000456948 PSMC3P17980 439 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 BMP6P22004 513 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 CLCN5P51795 746 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 NLRP12P59046 1061 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 SPOPLQ6IQ16 392 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 TTI2Q6NXR4 508 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 DENND5BQ6ZUT9 1274 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 MLKLQ8NB16 471 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 IRF7Q92985 503 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 C8orf48Q96LL4 319 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 NUP62CLQ9H1M0 184 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 DPEP3Q9H4B8 488 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms