RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 HS2ST1Q7LGA3 356 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 CCDC60Q8IWA6 550 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 FAM186BQ8IYM0 893 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 SLC7A5P1Q8MH63 180 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 PLEKHO2Q8TD55 490 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 HGH1Q9BTY7 390 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 STRA6Q9BX79 667 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 DRC3Q9H069 523 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 MYLK2Q9H1R3 596 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 CLK4Q9HAZ1 481 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 RRAGCQ9HB90 399 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 STXBP5LQ9Y2K9 1186 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 HBS1LQ9Y450 684 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 PLXNB2O15031 1838 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 SH3PXD2BA1X283 911 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 VILLO15195 856 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 EPHB6O15197 1021 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 SLC16A3O15427 465 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 RGS16O15492 202 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 AKAP3O75969 853 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 STBD1O95210 358 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 PSMG1O95456 288 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 OXSR1O95747 527 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 SUPT20HL2P0C7V6 817 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 CYP2C8P10632 490 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 HSPA8P11142 646 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 CETPP11597 493 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 EPHB2P29323 1055 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 GRIA2P42262 883 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 YARSP54577 528 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 PPIDQ08752 370 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 KCNH2Q12809 1159 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 ALCAMQ13740 583 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 HNRNPDQ14103 355 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 NFIL3Q16649 462 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 CGB2Q6NT52 195 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 INTS8Q75QN2 995 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 BPHLQ86WA6 291 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 DDX42Q86XP3 938 aaKnown RBP eCLIP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 ANKRD13BQ86YJ7 626 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 CACTIN-AS1Q8N1I8 211 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 CKAP2Q8WWK9 683 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 NMD3Q96D46 503 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 DNAJC1Q96KC8 554 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 CEP170P1Q96L14 293 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 MMP19Q99542 508 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 CCT7Q99832 543 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 MROH8Q9H579 483 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 AZI2Q9H6S1 392 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 USP29Q9HBJ7 922 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 GBA2Q9HCG7 927 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 GPRC5CQ9NQ84 441 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 ATAD3AQ9NVI7 634 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 SALL4Q9UJQ4 1053 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 TTC7AQ9ULT0 858 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 GIT1Q9Y2X7 761 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 FBP2O00757 339 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 ATG7O95352 703 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 T-ENOLP0DO92 83 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 NAT2P11245 290 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 XRCC5P13010 732 aaKnown RBP8.01□□□□□ -1.13
HDAC9-218ENST00000456174 UBA1P22314 1058 aaKnown RBP8.01□□□□□ -1.13
HDAC9-218ENST00000456174 PSMC2P35998 433 aaKnown RBP8.01□□□□□ -1.13
HDAC9-218ENST00000456174 IFNAR2P48551 515 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 NEK3P51956 506 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 GTF2A2P52657 109 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 KIF11P52732 1056 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 POLGP54098 1239 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-218ENST00000456174 PEX3P56589 373 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 FKBP1BP68106 108 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 PRKCEQ02156 737 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 TBL3Q12788 808 aaKnown RBP8.01□□□□□ -1.13
HDAC9-218ENST00000456174 MTFR1Q15390 333 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 MEI1Q5TIA1 1274 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 IL23RQ5VWK5 629 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 EEPD1Q7L9B9 569 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 HAUS6Q7Z4H7 955 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 KLHL7Q8IXQ5 586 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 EFCAB3Q8N7B9 438 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 MS4A4AQ96JQ5 239 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 SLITRK6Q9H5Y7 841 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 AGPAT3Q9NRZ7 376 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 SEPT9Q9UHD8 586 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-218ENST00000456174 SYNGAP1Q96PV0 1343 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 IGSF9BQ9UPX0 1349 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 DNAJC25-GNG10A0A024R161 153 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 CCL15-CCL14A0A0B4J2E2 113 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 GOLGA8TH3BQL2 631 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 PDHXO00330 501 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 CAPN9O14815 690 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 SLC16A4O15374 487 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 AP1G1O43747 822 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 ADAM23O75077 832 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 TBX10O75333 385 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 KRT36O76013 467 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 TGFB3P10600 412 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 PTPN2P17706 415 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 PTPN4P29074 926 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 CYP2J2P51589 502 aa8.01□□□□□ -1.13
HDAC9-218ENST00000456174 IFI35P80217 286 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms