RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 LRRC3BQ96PB8 259 aa8.64□□□□□ -1.03
NIF3L1-209ENST00000454952 TMEM206Q9H813 350 aa8.64□□□□□ -1.03
NIF3L1-209ENST00000454952 IL21Q9HBE4 155 aa8.64□□□□□ -1.03
NIF3L1-209ENST00000454952 VPS45Q9NRW7 570 aa8.64□□□□□ -1.03
NIF3L1-209ENST00000454952 ANGPTL2Q9UKU9 493 aa8.64□□□□□ -1.03
NIF3L1-209ENST00000454952 R3HCC1Q9Y3T6 440 aaKnown RBP8.64□□□□□ -1.03
NIF3L1-209ENST00000454952 TRAV19A0A0A6YYK7 116 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 AXIN1O15169 862 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 EXTL3O43909 919 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 HUS1O60921 280 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 PRPF40AO75400 957 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 LDHAP00338 332 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 F11P03951 625 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 NUDT7P0C024 238 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 USP17L7P0C7H9 530 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 GAP43P17677 238 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 PFKLP17858 780 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 PLCG1P19174 1290 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 PCSK1P29120 753 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 DDIT3P35638 169 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 TXLNAP40222 546 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 SHC2P98077 582 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 FAM160A1Q05DH4 1040 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 ALCAMQ13740 583 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 MCM6Q14566 821 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 WSCD1Q658N2 575 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 FSTL4Q6MZW2 842 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 SLC39A4Q6P5W5 647 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 LRRC52Q8N7C0 313 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 MAB21L3Q8N8X9 362 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 GIPC2Q8TF65 315 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 USP13Q92995 863 aaPredicted RBP8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 TRMT2BQ96GJ1 504 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 FUBP3Q96I24 572 aaKnown RBP eCLIP8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 CEP295NLQ96MC4 621 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 KIF2CQ99661 725 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 P2RY13Q9BPV8 354 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 ACBD6Q9BR61 282 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 ARRDC1-AS1Q9H2J1 176 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 EBF3Q9H4W6 596 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 BLOC1S4Q9NUP1 217 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 EHD2Q9NZN4 543 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 STK17AQ9UEE5 414 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 SMC3Q9UQE7 1217 aa8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.63□□□□□ -1.03
NIF3L1-209ENST00000454952 EML5Q05BV3 1969 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 RNF40O75150 1001 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 NOL4O94818 638 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 APBB3O95704 486 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 HMGA1P17096 107 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 GJB2P29033 226 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 NMT1P30419 496 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 MPLP40238 635 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 IFNAR2P48551 515 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 LHX1P48742 406 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 MTF1Q14872 753 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 MAPRE1Q15691 268 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 CFAP221Q4G0U5 840 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 WDR44Q5JSH3 913 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 PLA2G2CQ5R387 149 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 STPG1Q5TH74 334 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 C4orf50Q6ZRC1 276 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 SYT13Q7L8C5 426 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 ZNF720Q7Z2F6 126 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 KBTBD6Q86V97 674 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 LRRTM3Q86VH5 581 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 KIAA1958Q8N8K9 716 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 OSCP1Q8WVF1 389 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 MYRFLQ96LU7 910 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 ACCSQ96QU6 501 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 FIZ1Q96SL8 496 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 PI4K2AQ9BTU6 479 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 SMG9Q9H0W8 520 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 MRPL44Q9H9J2 332 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 UPF2Q9HAU5 1272 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 HPS4Q9NQG7 708 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 DUS2Q9NX74 493 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 DDX43Q9NXZ2 648 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 EBF1Q9UH73 591 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 ITGA11Q9UKX5 1188 aa8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 MAGED2Q9UNF1 606 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 KMT2BQ9UMN6 2715 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-209ENST00000454952 NUP205Q92621 2012 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 HELZP42694 1942 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 ANAPC1Q9H1A4 1944 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 ANKRD63C9JTQ0 380 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 KIAA0391O15091 583 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 GDF9O60383 454 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 KRT37O76014 449 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 EGFP01133 1207 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 CKMP06732 381 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 TCF3P15923 654 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 PDCP20941 246 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 GARTP22102 1010 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 PMLP29590 882 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 POLR2BP30876 1174 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 MAGEA11P43364 429 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 PPP3CCP48454 512 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 RBP5P82980 135 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms