RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PARVGQ9HBI0 331 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 SMPD4Q9NXE4 827 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 DPP3Q9NY33 737 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 LARSQ9P2J5 1176 aaKnown RBP6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 WASF3Q9UPY6 502 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ADAMTS9Q9P2N4 1935 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PI4KAP42356 2102 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 LAD1O00515 517 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 XPOTO43592 962 aaKnown RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 TRAK2O60296 914 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 APBB3O95704 486 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 F11P03951 625 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CYP11A1P05108 521 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ADRB2P07550 413 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 KRT19P08727 400 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ZNF806P0C7X5 589 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GJB2P29033 226 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ADSSP30520 456 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GALK1P51570 392 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 DGKEP52429 567 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ZNF131P52739 623 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 USP46P62068 366 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ZXDBP98169 803 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 IFRD2Q12894 506 aaPredicted RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 COL9A2Q14055 689 aaPredicted RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GAB4Q2WGN9 574 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 UAP1L1Q3KQV9 507 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PLA2G2CQ5R387 149 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 SH3PXD2AQ5TCZ1 1133 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CC2D1AQ6P1N0 951 aaPredicted RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CRELD2Q6UXH1 353 aaPredicted RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 UNQ6494/PRO21346Q6UXR6 183 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 C12orf40Q86WS4 652 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ADGRF2Q8IZF7 708 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CPA6Q8N4T0 437 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ARL14EPQ8N8R7 260 aaPredicted RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 C1orf127Q8N9H9 656 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GLIS3Q8NEA6 775 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 DEFB124Q8NES8 71 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MDGA1Q8NFP4 955 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 TSTD1Q8NFU3 115 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 OR2I1PQ8NGU4 316 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CXorf38Q8TB03 319 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 SH3RF2Q8TEC5 729 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 POMGNT1Q8WZA1 660 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MRPS31Q92665 395 aaKnown RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 HPS3Q969F9 1004 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MYLPFQ96A32 169 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 COL26A1Q96A83 441 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ELMO3Q96BJ8 720 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CBWD1Q9BRT8 395 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 TIPINQ9BVW5 301 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ECT2Q9H8V3 914 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 SH2B1Q9NRF2 756 aaPredicted RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 TDP1Q9NUW8 608 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 THG1LQ9NWX6 298 aaKnown RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 DUS2Q9NX74 493 aaKnown RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 OBP2AQ9NY56 170 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 AGO2Q9UKV8 859 aaKnown RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ODF2LQ9ULJ1 636 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MAFFQ9ULX9 164 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ASB3Q9Y575 518 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 NME7Q9Y5B8 376 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PCDHB5Q9Y5E4 795 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ACACAQ13085 2346 aa6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MYO18AQ92614 2054 aaKnown RBP6.45□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PCNX2A6NKB5 2137 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 BPTFQ12830 3046 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 TRAV19A0A0A6YYK7 116 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 KPNA7A9QM74 516 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 H3BQV1 296 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 TRDMT1O14717 391 aaKnown RBP6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 FGF19O95750 216 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CAVIN2O95810 425 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CYP17A1P05093 508 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 HOXA6P31267 233 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CNR2P34972 360 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 UBA7P41226 1012 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PTGER3P43115 390 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 IFNAR2P48551 515 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 DHPSP49366 369 aaPredicted RBP6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 TUFMP49411 452 aaKnown RBP6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 LIMK1P53667 647 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CACNA2D1P54289 1103 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MLLT6P55198 1093 aaPredicted RBP6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 TSPY1Q01534 308 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 KCNB1Q14721 858 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ELF2Q15723 593 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 EML3Q32P44 896 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 SV2CQ496J9 727 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 RILPL1Q5EBL4 403 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 INTS6LQ5JSJ4 861 aaKnown RBP6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 FAM173BQ6P4H8 233 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 C1orf228Q6PIY5 440 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CYP2U1Q7Z449 544 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MON1AQ86VX9 555 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 METTL23Q86XA0 190 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 DEFB119Q8N690 84 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ALLCQ8N6M5 410 aa6.44□□□□□ -1.38
HLA-DPA3-207ENST00000454398 SPPL2BQ8TCT7 592 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms