RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ASB3Q9Y575 518 aa29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 C19orf67A6NJJ6 358 aa29.79■■■□□ 2.36
SMARCC1-203ENST00000454240 ZNF18P17022 549 aa29.79■■■□□ 2.36
SMARCC1-203ENST00000454240 ORC1Q13415 861 aa29.79■■■□□ 2.36
SMARCC1-203ENST00000454240 VSTM1Q6UX27 236 aa29.79■■■□□ 2.36
SMARCC1-203ENST00000454240 DHX40Q8IX18 779 aaKnown RBP29.79■■■□□ 2.36
SMARCC1-203ENST00000454240 UBR7Q8N806 425 aa29.79■■■□□ 2.36
SMARCC1-203ENST00000454240 ELOVL4Q9GZR5 314 aa29.79■■■□□ 2.36
SMARCC1-203ENST00000454240 AVENQ9NQS1 362 aaPredicted RBP29.79■■■□□ 2.36
SMARCC1-203ENST00000454240 USTQ9Y2C2 406 aa29.79■■■□□ 2.36
SMARCC1-203ENST00000454240 DOCK8Q8NF50 2099 aa29.79■■■□□ 2.36
SMARCC1-203ENST00000454240 GREB1Q4ZG55 1949 aa29.79■■■□□ 2.36
SMARCC1-203ENST00000454240 LOC730098B7Z3J9 87 aa29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 RHOP08100 348 aa29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 BDNFP23560 247 aa29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 KRT31Q15323 416 aa29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 EXOC3L4Q17RC7 722 aa29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 PABPC1LQ4VXU2 614 aaKnown RBP29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 IQCEQ6IPM2 695 aa29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 PHLDB3Q6NSJ2 640 aa29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 ARHGEF19Q8IW93 802 aa29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 PPM1KQ8N3J5 372 aa29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 PSMG2Q969U7 264 aa29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 NECAB3Q96P71 396 aaPredicted RBP29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 CORO1BQ9BR76 489 aa29.78■■■□□ 2.36
SMARCC1-203ENST00000454240 SMTNL1A8MU46 457 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 SLC9A1P19634 815 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 GPR15P49685 360 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 EPHA5P54756 1037 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 RPL10AP62906 217 aaKnown RBP29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 GCNT1Q02742 428 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 TRIM65Q6PJ69 517 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 PAQR9Q6ZVX9 377 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 DNAJB7Q7Z6W7 309 aaPredicted RBP29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 RPGRIP1Q96KN7 1286 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 UHRF1Q96T88 793 aaPredicted RBP29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 LRRC3Q9BY71 257 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 TAB2Q9NYJ8 693 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 NR2E1Q9Y466 385 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 MYH10P35580 1976 aa29.77■■■□□ 2.36
SMARCC1-203ENST00000454240 FSHRP23945 695 aa29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 PON1P27169 355 aa29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 RAD23BP54727 409 aa29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 YWHAEP62258 255 aaKnown RBP29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 IQCB1Q15051 598 aa29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 DDR2Q16832 855 aa29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 RRAGAQ7L523 313 aa29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 ITIH5Q86UX2 942 aa29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 HS6ST3Q8IZP7 471 aa29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 C12orf29Q8N999 325 aa29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 KAT5Q92993 513 aa29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 ZNF518BQ9C0D4 1074 aa29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 LIMA1Q9UHB6 759 aaKnown RBP29.76■■■□□ 2.35
SMARCC1-203ENST00000454240 LRRC10BA6NIK2 292 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 CLDN5O00501 218 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 TRIM21P19474 475 aaKnown RBP29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 ACO1P21399 889 aaKnown RBP29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 VEPH1Q14D04 833 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 ZNF394Q53GI3 561 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 TMC8Q8IU68 726 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 FUKQ8N0W3 1084 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 SLC4A11Q8NBS3 891 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 LEMD2Q8NC56 503 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 GIPC2Q8TF65 315 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 TMEM176AQ96HP8 235 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 DNAI2Q9GZS0 605 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 VPS16Q9H269 839 aa29.75■■■□□ 2.35
SMARCC1-203ENST00000454240 SLC5A9Q2M3M2 681 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 PRSS36Q5K4E3 855 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 CYP4A22Q5TCH4 519 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 SDHAF4Q5VUM1 108 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 OTOP3Q7RTS5 596 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 SCN4BQ8IWT1 228 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 ITFG1Q8TB96 612 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 FAM200AQ8TCP9 573 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 GPR152Q8TDT2 470 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 CEP295NLQ96MC4 621 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 KREMEN1Q96MU8 473 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 ASAH2Q9NR71 780 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 TMEM30AQ9NV96 361 aa29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.74■■■□□ 2.35
SMARCC1-203ENST00000454240 DENND4CQ5VZ89 1909 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 C2CD4DB7Z1M9 353 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 CAVIN2O95810 425 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 CCDC130P13994 396 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 CDK11BP21127 795 aaKnown RBP29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 SP100P23497 879 aaPredicted RBP29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 GRIK1P39086 918 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 CACNA2D1P54289 1103 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 KCNMA1Q12791 1236 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 PDZD4Q76G19 769 aaPredicted RBP29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 FAM35AQ86V20 835 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 ANKRD20A12PQ8NF67 263 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 JAKMIP2Q96AA8 810 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 CYFIP2Q96F07 1278 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 SPATA17Q96L03 361 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 C8orf48Q96LL4 319 aa29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 HNRNPABQ99729 332 aaKnown RBP29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 UBE2TQ9NPD8 197 aaPredicted RBP29.73■■■□□ 2.35
SMARCC1-203ENST00000454240 CD320Q9NPF0 282 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms