RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 ANKRD22Q5VYY1 191 aa14.51□□□□□ -0.09
UBE2D3-210ENST00000453744 PCGF5Q86SE9 256 aa14.51□□□□□ -0.09
UBE2D3-210ENST00000453744 SLC9A9Q8IVB4 645 aa14.51□□□□□ -0.09
UBE2D3-210ENST00000453744 GSDMBQ8TAX9 411 aa14.51□□□□□ -0.09
UBE2D3-210ENST00000453744 SNRNP27Q8WVK2 155 aaKnown RBP14.51□□□□□ -0.09
UBE2D3-210ENST00000453744 TMEM143Q96AN5 459 aa14.51□□□□□ -0.09
UBE2D3-210ENST00000453744 GORASP1Q9BQQ3 440 aa14.51□□□□□ -0.09
UBE2D3-210ENST00000453744 RAD17O75943 681 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 CYP24A1Q07973 514 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 SLC15A2Q16348 729 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 NXNQ6DKJ4 435 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 ENOSF1Q7L5Y1 443 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 SPATA18Q8TC71 538 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 ALKBH8Q96BT7 664 aaKnown RBP14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 ATXN7L3BQ96GX2 97 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 RMDN3Q96TC7 470 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 TRPM3Q9HCF6 1732 aaPredicted RBP14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 PARP4Q9UKK3 1724 aaKnown RBP14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 NFIBO00712 420 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 FAM155BO75949 473 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 PSMC1P62191 440 aaKnown RBP14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 PPP6R3Q5H9R7 873 aaPredicted RBP14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 NME8Q8N427 588 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 ANKLE1Q8NAG6 615 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 PTPRN2Q92932 1015 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 ZNF395Q9H8N7 513 aaPredicted RBP14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 DDX18Q9NVP1 670 aaKnown RBP14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 CCDC88AQ3V6T2 1871 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 KBTBD13C9JR72 458 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 MAP3K13O43283 966 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 PYGLP06737 847 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 MOGSQ13724 837 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 TFDP3Q5H9I0 405 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 GPAT2Q6NUI2 795 aa14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 NGRNQ9NPE2 291 aaKnown RBP14.5□□□□□ -0.09
UBE2D3-210ENST00000453744 AVILO75366 819 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 USP4Q13107 963 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 STX3Q13277 289 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 PLEKHG4Q58EX7 1191 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 TCHHL1Q5QJ38 904 aaPredicted RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 TRIM42Q8IWZ5 723 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 IL31RAQ8NI17 732 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 EZH1Q92800 747 aaPredicted RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 ZC3H7BQ9UGR2 993 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 GRAP2O75791 330 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 POLR2BP30876 1174 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 LBRQ14739 615 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 WDR78Q5VTH9 848 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 TMPRSS6Q8IU80 811 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 RBM15BQ8NDT2 890 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 GSTCDQ8NEC7 633 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 DEPDC1BQ8WUY9 529 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 MKL1Q969V6 931 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 MBOAT7Q96N66 472 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 SRPK1Q96SB4 655 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 PRPF4O43172 522 aaKnown RBP eCLIP14.49□□□□□ -0.093e-7■■□□□ 13.1
UBE2D3-210ENST00000453744 ZBED1O96006 694 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 LYNP07948 512 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 KRT3P12035 628 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 ANPEPP15144 967 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 CDH6P55285 790 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 UBAP2LQ14157 1087 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 ARHGAP18Q8N392 663 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 RIT2Q99578 217 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 NDNQ99608 321 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 POLR3FQ9H1D9 316 aaPredicted RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 CNTNAP4Q9C0A0 1308 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 NDC80O14777 642 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 ABHD2P08910 425 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 TMEM191BP0C7N4 346 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 ITGB5P18084 799 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 CUL2Q13617 745 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 FNBP1LQ5T0N5 605 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 KATNAL2Q8IYT4 538 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 GALNT4Q8N4A0 578 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 PRPF31Q8WWY3 499 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 ZBTB45Q96K62 511 aaPredicted RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 ASCC2Q9H1I8 757 aaPredicted RBP14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 WDR35Q9P2L0 1181 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 SHOC2Q9UQ13 582 aa14.49□□□□□ -0.09
UBE2D3-210ENST00000453744 DCCP43146 1447 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 MYH11P35749 1972 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 CYB561D2O14569 222 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 ALOX15BO15296 676 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 ZMPSTE24O75844 475 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 RTN3O95197 1032 aaPredicted RBP14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 CALB1P05937 261 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 AP1B1Q10567 949 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 BST1Q10588 318 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 NCOA4Q13772 614 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 LPCAT4Q643R3 524 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 CC2D2BQ6DHV5 1058 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 TXNRD3NBQ6F5E7 133 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 THNSL1Q8IYQ7 743 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 ABRAQ8N0Z2 381 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 ICA1LQ8NDH6 482 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 ATP2A3Q93084 1043 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 OLFM3Q96PB7 478 aa14.48□□□□□ -0.09
UBE2D3-210ENST00000453744 SLITRK1Q96PX8 696 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms