RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 MRPL9Q9BYD2 267 aaKnown RBP16.79■□□□□ 0.28
SNX17-204ENST00000453453 SMYD3Q9H7B4 428 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 IL23AQ9NPF7 189 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 CNTN6Q9UQ52 1028 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 CASTOR2A6NHX0 329 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 AMHP03971 560 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 PAEPP09466 180 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 TNFAIP3P21580 790 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 ITGB8P26012 769 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 MTMR3Q13615 1198 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 AGBL2Q5U5Z8 902 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 C7orf61Q8IZ16 206 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 UBR7Q8N806 425 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 CALR3Q96L12 384 aaKnown RBP16.78■□□□□ 0.28
SNX17-204ENST00000453453 RNPC3Q96LT9 517 aaKnown RBP16.78■□□□□ 0.28
SNX17-204ENST00000453453 CXorf56Q9H5V9 222 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 TMBIM4Q9HC24 238 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 GDAP2Q9NXN4 497 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 HUS1O60921 280 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 BAIAP3O94812 1187 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 CLCNKBP51801 687 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 LILRA4P59901 499 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 SLC7A5Q01650 507 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 SPDYCQ5MJ68 293 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
SNX17-204ENST00000453453 ZNF677Q86XU0 584 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 APPL2Q8NEU8 664 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 PIK3R5Q8WYR1 880 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 AGPAT1Q99943 283 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 ISCUQ9H1K1 167 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 SEPT11Q9NVA2 429 aaKnown RBP16.78■□□□□ 0.28
SNX17-204ENST00000453453 TBC1D13Q9NVG8 400 aa16.78■□□□□ 0.28
SNX17-204ENST00000453453 ARHGEF37A1IGU5 675 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 CYP11B1P15538 503 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 GNA15P30679 374 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 RDXP35241 583 aaKnown RBP16.77■□□□□ 0.27
SNX17-204ENST00000453453 FPGSQ05932 587 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 SLC18A3Q16572 532 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 IFI16Q16666 785 aaKnown RBP16.77■□□□□ 0.27
SNX17-204ENST00000453453 UPP1Q16831 310 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 MEI1Q5TIA1 1274 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 DPH6Q7L8W6 267 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 SLC47A2Q86VL8 602 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 TOP6BLQ8N6T0 577 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 EPS8L1Q8TE68 723 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 PBKQ96KB5 322 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 CCT8L2Q96SF2 557 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 TMEM59LQ9UK28 342 aa16.77■□□□□ 0.27
SNX17-204ENST00000453453 BARX2Q9UMQ3 279 aaPredicted RBP16.77■□□□□ 0.27
SNX17-204ENST00000453453 FNDC1Q4ZHG4 1894 aaPredicted RBP16.76■□□□□ 0.27
SNX17-204ENST00000453453 C5orf60A6NFR6 353 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 TBKBP1A7MCY6 615 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 RASSF9O75901 435 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 CARSP49589 748 aaKnown RBP16.76■□□□□ 0.27
SNX17-204ENST00000453453 ZNF132P52740 706 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 CDH8P55286 799 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 CDR2Q01850 454 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 IFFO1Q0D2I5 559 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 INCA1Q0VD86 236 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 PREPLQ4J6C6 727 aaPredicted RBP16.76■□□□□ 0.27
SNX17-204ENST00000453453 DCLRE1AQ6PJP8 1040 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 DSTYKQ6XUX3 929 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 NOP9Q86U38 636 aaKnown RBP16.76■□□□□ 0.27
SNX17-204ENST00000453453 CASD1Q96PB1 797 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 SDCBP2Q9H190 292 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 SNX25Q9H3E2 840 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 EPB41L5Q9HCM4 733 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 ADAMTS1Q9UHI8 967 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 NFU1Q9UMS0 254 aa16.76■□□□□ 0.27
SNX17-204ENST00000453453 CYB561D2O14569 222 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 CILPO75339 1184 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 UPP2O95045 317 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 GLI1P08151 1106 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 FAM163BP0C2L3 166 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 ACRP10323 421 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 CHRM1P11229 460 aaPredicted RBP16.75■□□□□ 0.27
SNX17-204ENST00000453453 GUCY2DQ02846 1103 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 GFPT1Q06210 699 aaPredicted RBP16.75■□□□□ 0.27
SNX17-204ENST00000453453 DSC1Q08554 894 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.75■□□□□ 0.274e-9■■■■■ 37.8
SNX17-204ENST00000453453 LRRC43Q8N309 656 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 CASKIN2Q8WXE0 1202 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 ZBTB9Q96C00 473 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 ABHD8Q96I13 439 aa16.75■□□□□ 0.27
SNX17-204ENST00000453453 NOCTQ9UK39 431 aaKnown RBP16.75■□□□□ 0.27
SNX17-204ENST00000453453 A0A087X0T9 212 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 SPTLC1O15269 473 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 THAP12O43422 761 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 B3GAT3O94766 335 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 FAM228BP0C875 321 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 OR1G1P47890 313 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 CDR1P51861 262 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 ZNF394Q53GI3 561 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 LACTB2Q53H82 288 aaPredicted RBP16.74■□□□□ 0.27
SNX17-204ENST00000453453 WLSQ5T9L3 541 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 PSRC1Q6PGN9 363 aaPredicted RBP16.74■□□□□ 0.27
SNX17-204ENST00000453453 UNC93AQ86WB7 457 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 GLYCTKQ8IVS8 523 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 COLGALT2Q8IYK4 626 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 337.3 ms