RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 DEPTORQ8TB45 409 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 ZNF398Q8TD17 642 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 MCUR1Q96AQ8 359 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 BTBD10Q9BSF8 475 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 ACSS3Q9H6R3 686 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 SSU72Q9NP77 194 aaKnown RBP16.51■□□□□ 0.23
TRA2B-205ENST00000453386 FBXO6Q9NRD1 293 aaPredicted RBP16.51■□□□□ 0.23
TRA2B-205ENST00000453386 MAP3K20Q9NYL2 800 aaKnown RBP16.51■□□□□ 0.23
TRA2B-205ENST00000453386 STOML1Q9UBI4 398 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 FBXO40Q9UH90 709 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 SNCAIPQ9Y6H5 919 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 TCRBV7S3A2A0A539 114 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 TM9SF1O15321 606 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 LPXNO60711 386 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 SERPINB3P29508 390 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 GPAT2Q6NUI2 795 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 VSIG10LQ86VR7 867 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 BANPQ8N9N5 519 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 TMEM35BQ8NCS4 154 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 TTC17Q96AE7 1141 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 VPS11Q9H270 941 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 JPH1Q9HDC5 661 aaPredicted RBP16.5■□□□□ 0.23
TRA2B-205ENST00000453386 ZNRF3Q9ULT6 936 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 IKBKGQ9Y6K9 419 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
TRA2B-205ENST00000453386 NVLO15381 856 aaKnown RBP16.5■□□□□ 0.23
TRA2B-205ENST00000453386 HNRNPCL1O60812 293 aaKnown RBP16.5■□□□□ 0.23
TRA2B-205ENST00000453386 CST3P01034 146 aaPredicted RBP16.5■□□□□ 0.23
TRA2B-205ENST00000453386 RPL22P35268 128 aaKnown RBP16.5■□□□□ 0.23
TRA2B-205ENST00000453386 BASP1P80723 227 aaKnown RBP16.5■□□□□ 0.23
TRA2B-205ENST00000453386 EMC2Q15006 297 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 RCN1Q15293 331 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 SPDYAQ5MJ70 313 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 SYCP2LQ5T4T6 812 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 PDIK1LQ8N165 341 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 CGRRF1Q99675 332 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 TLE6Q9H808 572 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 CNTN6Q9UQ52 1028 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 CHMP2BQ9UQN3 213 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 C2orf71A6NGG8 1288 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 PSMA2P25787 234 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 ZNF276Q8N554 614 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 DCAKDQ8WVC6 231 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 LPAR1Q92633 364 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 PRR11Q96HE9 360 aaPredicted RBP16.5■□□□□ 0.23
TRA2B-205ENST00000453386 NSL1Q96IY1 281 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 WDR83Q9BRX9 315 aaKnown RBP16.5■□□□□ 0.23
TRA2B-205ENST00000453386 XPO7Q9UIA9 1087 aaKnown RBP16.5■□□□□ 0.23
TRA2B-205ENST00000453386 RIPK3Q9Y572 518 aa16.5■□□□□ 0.23
TRA2B-205ENST00000453386 ACTR2P61160 394 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 MRPS35P82673 323 aaKnown RBP16.49■□□□□ 0.23
TRA2B-205ENST00000453386 MXRA7P84157 204 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 KLC1Q07866 573 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 KPNB1Q14974 876 aaKnown RBP16.49■□□□□ 0.23
TRA2B-205ENST00000453386 SLFN12LQ6IEE8 588 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 NAT8LQ8N9F0 302 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 ZNF483Q8TF39 744 aaPredicted RBP16.49■□□□□ 0.23
TRA2B-205ENST00000453386 ALKBH8Q96BT7 664 aaKnown RBP16.49■□□□□ 0.23
TRA2B-205ENST00000453386 GPRASP2Q96D09 838 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 FAM111AQ96PZ2 611 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 TMEM120AQ9BXJ8 343 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 METTL5Q9NRN9 209 aaKnown RBP16.49■□□□□ 0.23
TRA2B-205ENST00000453386 RNF146Q9NTX7 359 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 SPATS2LQ9NUQ6 558 aaKnown RBP16.49■□□□□ 0.23
TRA2B-205ENST00000453386 NMRK1Q9NWW6 199 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 SLC9A2Q9UBY0 812 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 RPL26L1Q9UNX3 145 aaKnown RBP16.49■□□□□ 0.23
TRA2B-205ENST00000453386 LTBP4Q8N2S1 1624 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 GSC2O15499 205 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 STAM2O75886 525 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 KRT36O76013 467 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 MYCNP04198 464 aaPredicted RBP16.49■□□□□ 0.23
TRA2B-205ENST00000453386 KCNA2P16389 499 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 TMEM154Q6P9G4 183 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 FAM71DQ8N9W8 422 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 DTX3LQ8TDB6 740 aa16.49■□□□□ 0.23
TRA2B-205ENST00000453386 TMEM63AO94886 807 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 LDHAP00338 332 aaKnown RBP16.48■□□□□ 0.23
TRA2B-205ENST00000453386 WEE2P0C1S8 567 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 ESRRAP11474 423 aaPredicted RBP16.48■□□□□ 0.23
TRA2B-205ENST00000453386 ACADSP16219 412 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 BGNP21810 368 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 FAM182AQ5T1J6 154 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 SNX30Q5VWJ9 437 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 SCARA5Q6ZMJ2 495 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 UNC45BQ8IWX7 931 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 SH3TC2Q8TF17 1288 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 TUBB6Q9BUF5 446 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRA2B-205ENST00000453386 STYXL1Q9Y6J8 313 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 TCRBV5S1A1TA0A578 114 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 PTPN7P35236 360 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 RFC1P35251 1148 aaPredicted RBP16.48■□□□□ 0.23
TRA2B-205ENST00000453386 VHLP40337 213 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 TUBP50607 506 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 NRLP54845 237 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 PTK7Q13308 1070 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 CCDC62Q6P9F0 684 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 MZB1Q8WU39 189 aa16.48■□□□□ 0.23
TRA2B-205ENST00000453386 PTCD3Q96EY7 689 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms