RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 HMGXB4Q9UGU5 601 aa15.54■□□□□ 0.08
NCKIPSD-207ENST00000453349 KIAA1257Q9ULG3 409 aa15.54■□□□□ 0.08
NCKIPSD-207ENST00000453349 TRANK1O15050 2925 aa15.54■□□□□ 0.08
NCKIPSD-207ENST00000453349 MTCL1Q9Y4B5 1905 aaKnown RBP15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 MBTPS2O43462 519 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 KRT5P13647 590 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 PTPN2P17706 415 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 BDNFP23560 247 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 GRIK1P39086 918 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 MTHFRP42898 656 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 MAGEA11P43364 429 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 UBASH3AP57075 661 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 APBA1Q02410 837 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 TFF2Q03403 129 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 SMAD4Q13485 552 aaKnown RBP15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 VEPH1Q14D04 833 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 TAF12Q16514 161 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 IQCEQ6IPM2 695 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 GJB7Q6PEY0 223 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 VSTM1Q6UX27 236 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 SCN4BQ8IWT1 228 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 UBR7Q8N806 425 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 SLC4A11Q8NBS3 891 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 SMRP1Q8NCR6 262 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 NEK11Q8NG66 645 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 KAT5Q92993 513 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 KREMEN1Q96MU8 473 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 NAP1L5Q96NT1 182 aaPredicted RBP15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 ERGIC2Q96RQ1 377 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 TWNKQ96RR1 684 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 RHOBTB2Q9BYZ6 727 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 CRISPLD1Q9H336 500 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 DAAM1Q9Y4D1 1078 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 YIPF1Q9Y548 306 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 ASB3Q9Y575 518 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 PRRC2BQ5JSZ5 2229 aaKnown RBP15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 MYO9BQ13459 2157 aa15.53■□□□□ 0.08
NCKIPSD-207ENST00000453349 A0A1B0GTH6 734 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 TRIM66O15016 1216 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 PAPLNO95428 1278 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 POU2F2P09086 479 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 PAEPP09466 180 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 VDRP11473 427 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 ACO1P21399 889 aaKnown RBP15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 RFX1P22670 979 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 ANXA13P27216 316 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 USP8P40818 1118 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 SYCP1Q15431 976 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 CCDC142Q17RM4 750 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 SMYD5Q6GMV2 418 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 PTCRAQ6ISU1 281 aaPredicted RBP15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 ITIH5Q86UX2 942 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 TTC9BQ8N6N2 239 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 C12orf29Q8N999 325 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 ZNF707Q96C28 371 aaPredicted RBP15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 NECTIN4Q96NY8 510 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 HNRNPABQ99729 332 aaKnown RBP15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 FAM49BQ9NUQ9 324 aa15.52■□□□□ 0.08
NCKIPSD-207ENST00000453349 RNF225M0QZC1 329 aaPredicted RBP15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 CLDN5O00501 218 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 TEX33O43247 280 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 SOAT2O75908 522 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 TPM3P06753 285 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 UCHL3P15374 230 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 CD19P15391 556 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 ADORA2BP29275 332 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 RAPGEF1Q13905 1077 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 NR1I3Q14994 352 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 DDR2Q16832 855 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 SGO2Q562F6 1265 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 DPY19L2P1Q6NXN4 242 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 RBBP8NLQ8NC74 664 aaPredicted RBP15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 SLC2A14Q8TDB8 520 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 GIPC2Q8TF65 315 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 SMARCD1Q96GM5 515 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 FAM207AQ9NSI2 230 aaPredicted RBP15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 CNTN6Q9UQ52 1028 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 SIK3Q9Y2K2 1263 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 USP15Q9Y4E8 981 aaPredicted RBP15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 SZT2Q5T011 3432 aa15.51■□□□□ 0.07
NCKIPSD-207ENST00000453349 GRXCR2A6NFK2 248 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 CBFA2T2O43439 604 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 AP1G2O75843 785 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 CSH1P0DML2 217 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 CSH2P0DML3 217 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 CCDC130P13994 396 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 KLK7P49862 253 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 SLC8A3P57103 927 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 POLR2FP61218 127 aaKnown RBP15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 CBX2Q14781 532 aaPredicted RBP15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 DRAP1Q14919 205 aaPredicted RBP15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 PPP1R26Q5T8A7 1209 aaPredicted RBP15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 CYP4A22Q5TCH4 519 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 PAQR9Q6ZVX9 377 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 GRASPQ7Z6J2 395 aaPredicted RBP15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 FAM35AQ86V20 835 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 FUKQ8N0W3 1084 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 SUSD6Q92537 303 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 C8orf48Q96LL4 319 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms