RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 TCEAL4Q96EI5 215 aa16.53■□□□□ 0.24
VPS8-213ENST00000453056 FAXDC2Q96IV6 333 aa16.53■□□□□ 0.24
VPS8-213ENST00000453056 BCO2Q9BYV7 579 aa16.53■□□□□ 0.24
VPS8-213ENST00000453056 ELOVL4Q9GZR5 314 aa16.53■□□□□ 0.24
VPS8-213ENST00000453056 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.53■□□□□ 0.248e-8■■■■■ 44.9
VPS8-213ENST00000453056 RAB20Q9NX57 234 aa16.53■□□□□ 0.24
VPS8-213ENST00000453056 UXTQ9UBK9 157 aaPredicted RBP16.53■□□□□ 0.24
VPS8-213ENST00000453056 ANHXE9PGG2 379 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 TRIM66O15016 1216 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 PTPN1P18031 435 aaKnown RBP16.52■□□□□ 0.24
VPS8-213ENST00000453056 CDH8P55286 799 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 SIGLEC14Q08ET2 396 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 TPD52L1Q16890 204 aaPredicted RBP16.52■□□□□ 0.24
VPS8-213ENST00000453056 CCDC142Q17RM4 750 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 UNC93AQ86WB7 457 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 SCN4BQ8IWT1 228 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 GPT2Q8TD30 523 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 GIPC2Q8TF65 315 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 PCED1BQ96HM7 432 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 CEP295NLQ96MC4 621 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 SRRTQ9BXP5 876 aaKnown RBP16.52■□□□□ 0.24
VPS8-213ENST00000453056 GPR88Q9GZN0 384 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 DPEP3Q9H4B8 488 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 APOBEC3GQ9HC16 384 aaKnown RBP16.52■□□□□ 0.24
VPS8-213ENST00000453056 DUSP12Q9UNI6 340 aa16.52■□□□□ 0.24
VPS8-213ENST00000453056 GREB1Q4ZG55 1949 aa16.52■□□□□ 0.23
VPS8-213ENST00000453056 NUP210Q8TEM1 1887 aaPredicted RBP16.51■□□□□ 0.23
VPS8-213ENST00000453056 BDNFP23560 247 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 GABRR2P28476 465 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 GRIK1P39086 918 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 CCR2P41597 374 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 FMO5P49326 533 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 NLRP12P59046 1061 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 INCA1Q0VD86 236 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 TEAD2Q15562 447 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 CBWD6Q4V339 395 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 CBWD3Q5JTY5 395 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 CBWD5Q5RIA9 395 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 SHKBP1Q8TBC3 707 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 MCRS1Q96EZ8 462 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 SDCBP2Q9H190 292 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 FAM124BQ9H5Z6 455 aaPredicted RBP16.51■□□□□ 0.23
VPS8-213ENST00000453056 EHD2Q9NZN4 543 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 ZMYM5Q9UJ78 669 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 NUMBLQ9Y6R0 609 aa16.51■□□□□ 0.23
VPS8-213ENST00000453056 OBSL1O75147 1896 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 F5P12259 2224 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 A0A1W2PRU2 124 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 FAM86C2PA6NEL3 165 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 PMM2O15305 246 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 P4HA2O15460 535 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 GPR37L1O60883 481 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 GPR15P49685 360 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 NDST1P52848 882 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 MARSP56192 900 aaKnown RBP16.5■□□□□ 0.23
VPS8-213ENST00000453056 YWHAEP62258 255 aaKnown RBP16.5■□□□□ 0.23
VPS8-213ENST00000453056 DDR2Q16832 855 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 DPCR1Q3MIW9 517 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 TRIM67Q6ZTA4 783 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 FAM114A1Q8IWE2 563 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 GPR152Q8TDT2 470 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 SEMA4DQ92854 862 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 MED10Q9BTT4 135 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 NT5C1AQ9BXI3 368 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 LRRC3Q9BY71 257 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 ATXN3LQ9H3M9 355 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 ZNF334Q9HCZ1 680 aaPredicted RBP16.5■□□□□ 0.23
VPS8-213ENST00000453056 MAGED2Q9UNF1 606 aaPredicted RBP16.5■□□□□ 0.23
VPS8-213ENST00000453056 COQ4Q9Y3A0 265 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 NME7Q9Y5B8 376 aa16.5■□□□□ 0.23
VPS8-213ENST00000453056 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.5■□□□□ 0.23
VPS8-213ENST00000453056 TMEM221A6NGB7 291 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 M0R296 226 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 ECI2O75521 394 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 NOL4O94818 638 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 CD58P19256 250 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 ERCC5P28715 1186 aaPredicted RBP16.49■□□□□ 0.23
VPS8-213ENST00000453056 CT47A1Q5JQC4 288 aaPredicted RBP16.49■□□□□ 0.23
VPS8-213ENST00000453056 CCDC183Q5T5S1 534 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 SDHAF4Q5VUM1 108 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 PARM1Q6UWI2 310 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 ACOT1Q86TX2 421 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 TRIM59Q8IWR1 403 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 RSAD2Q8WXG1 361 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 SMARCD2Q92925 531 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 TRMT2BQ96GJ1 504 aaKnown RBP16.49■□□□□ 0.23
VPS8-213ENST00000453056 SMARCD1Q96GM5 515 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 SPATA17Q96L03 361 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 CNOT6LQ96LI5 555 aaKnown RBP16.49■□□□□ 0.23
VPS8-213ENST00000453056 ZNF518BQ9C0D4 1074 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 ZFP14Q9HCL3 533 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 FBXL21Q9UKT6 434 aa16.49■□□□□ 0.23
VPS8-213ENST00000453056 ZNF318Q5VUA4 2279 aa16.48■□□□□ 0.23
VPS8-213ENST00000453056 SLC38A8A6NNN8 435 aa16.48■□□□□ 0.23
VPS8-213ENST00000453056 PRR33A8MZF0 331 aa16.48■□□□□ 0.23
VPS8-213ENST00000453056 F8VP50 259 aa16.48■□□□□ 0.23
VPS8-213ENST00000453056 CILPO75339 1184 aa16.48■□□□□ 0.23
VPS8-213ENST00000453056 MOSPD3O75425 235 aa16.48■□□□□ 0.23
VPS8-213ENST00000453056 AFPP02771 609 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms