RNA–Protein interactions for RNA: ENST00000452977.5

CTDSP1-205, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-205ENST00000452977 PFKLP17858 780 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 ACAT1P24752 427 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 AP3M2P53677 418 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 TNNC1P63316 161 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 PSMD6Q15008 389 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 BMT2Q1RMZ1 405 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 SOWAHAQ2M3V2 549 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 RESP18Q5W5W9 173 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 MON1AQ86VX9 555 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 MAB21L3Q8N8X9 362 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 HPS3Q969F9 1004 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 MMS19Q96T76 1030 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 CGRRF1Q99675 332 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 SYT15Q9BQS2 421 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 SLC46A2Q9BY10 475 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 TMLHEQ9NVH6 421 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 MAGEC2Q9UBF1 373 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 PCDHA7Q9UN72 937 aa16.56■□□□□ 0.24
CTDSP1-205ENST00000452977 OTOGLQ3ZCN5 2332 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 TRAV19A0A0A6YYK7 116 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 TRIM66O15016 1216 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 PAPSS2O95340 614 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 SDHBP21912 280 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 WARSP23381 471 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 CYP2F1P24903 491 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 ANXA13P27216 316 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 ATICP31939 592 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 CNR2P34972 360 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 CYP2J2P51589 502 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 CYP24A1Q07973 514 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 EHHADHQ08426 723 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 TRPC3Q13507 836 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 PDGFRLQ15198 375 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 KNOP1Q1ED39 458 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 LMBRD2Q68DH5 695 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 FAM171BQ6P995 826 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 TRAPPC11Q7Z392 1133 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 SUMF1Q8NBK3 374 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 OR5B17Q8NGF7 314 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 SCFD1Q8WVM8 642 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 SYAP1Q96A49 352 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 SPATA17Q96L03 361 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 PKMYT1Q99640 499 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 SNX25Q9H3E2 840 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 GTSE1Q9NYZ3 720 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 GMEB2Q9UKD1 530 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 SMG5Q9UPR3 1016 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 COL4A3Q01955 1670 aa16.55■□□□□ 0.24
CTDSP1-205ENST00000452977 TGFB1I1O43294 461 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 EXOC3O60645 756 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 TACC1O75410 805 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 KIF20AO95235 890 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 STAU1O95793 577 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 USP17L7P0C7H9 530 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 SLFN14P0C7P3 912 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 PPP3CCP48454 512 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 FAM160A1Q05DH4 1040 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 GRSF1Q12849 480 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 PSMD2Q13200 908 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 DDR2Q16832 855 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 FOXD4L6Q3SYB3 417 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 FOXD4L3Q6VB84 417 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 LIMS2Q7Z4I7 341 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 OSTM1Q86WC4 334 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 SCN4BQ8IWT1 228 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 NELFCDQ8IXH7 590 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 RDH13Q8NBN7 331 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 GLIS3Q8NEA6 775 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 CCDC47Q96A33 483 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 GKN1Q9NS71 199 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 EXOC1Q9NV70 894 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 RCOR1Q9UKL0 485 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 ATP6V1DQ9Y5K8 247 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 DMDP11532 3685 aa16.54■□□□□ 0.24
CTDSP1-205ENST00000452977 ATG13O75143 517 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 PHACTR2O75167 634 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 CKMP06732 381 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 TRIM21P19474 475 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 HOXD13P35453 343 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 AFMP43652 599 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 RUNX3Q13761 415 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 KCNB1Q14721 858 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 TSSK4Q6SA08 328 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 TMEM150AQ86TG1 271 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 KIAA2013Q8IYS2 634 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 CPA6Q8N4T0 437 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 CCDC26Q8TAB7 109 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 MYCBPAPQ8TBZ2 947 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 USP13Q92995 863 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 CCDC127Q96BQ5 260 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 CCDC34Q96HJ3 373 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 ZFYVE19Q96K21 471 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 LRRC3BQ96PB8 259 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 FAM83CQ9BQN1 747 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 BLZF1Q9H2G9 400 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 SLC39A2Q9NP94 309 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 SPTBN4Q9H254 2564 aa16.53■□□□□ 0.24
CTDSP1-205ENST00000452977 ATP8B3O60423 1300 aa16.52■□□□□ 0.24
CTDSP1-205ENST00000452977 PTPRJQ12913 1337 aa16.52■□□□□ 0.24
CTDSP1-205ENST00000452977 ZNF638Q14966 1978 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms