RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 BTBD19C9JJ37 291 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 UBE2Q2LH0YL09 131 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 PPM1DO15297 605 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 PRKCBP05771 671 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 HK3P52790 923 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 PSMC1P62191 440 aaKnown RBP3□□□□□ -1.93
LRCH3-209ENST00000452660 KIF23Q02241 960 aaPredicted RBP3□□□□□ -1.93
LRCH3-209ENST00000452660 MEX3CQ5U5Q3 659 aaKnown RBP3□□□□□ -1.93
LRCH3-209ENST00000452660 SYDE2Q5VT97 1194 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 DEF8Q6ZN54 512 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 ABHD11Q8NFV4 315 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 ZNF398Q8TD17 642 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 NSMCE1Q8WV22 266 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 RAB24Q969Q5 203 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 RSPRY1Q96DX4 576 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 TEKT5Q96M29 485 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 VRK1Q99986 396 aaPredicted RBP3□□□□□ -1.93
LRCH3-209ENST00000452660 MRPL46Q9H2W6 279 aaKnown RBP3□□□□□ -1.93
LRCH3-209ENST00000452660 EBF3Q9H4W6 596 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 WWOXQ9NZC7 414 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 AGAP1Q9UPQ3 857 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 AFG3L2Q9Y4W6 797 aa3□□□□□ -1.93
LRCH3-209ENST00000452660 CNTNAP2Q9UHC6 1331 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 LY6G6EA0A0G2JKS1 128 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 KCNU1A8MYU2 1149 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 SMIM22K7EJ46 135 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 FZD9O00144 591 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 ERC2O15083 957 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 PCDHGA12O60330 932 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 DTNBO60941 627 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 KIF20AO95235 890 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 PIM1P11309 404 aaPredicted RBP2.99□□□□□ -1.93
LRCH3-209ENST00000452660 CYP2C9P11712 490 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 VIPR2P41587 438 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 RGS19P49795 217 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 CYP4F2P78329 520 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 ACAP2Q15057 778 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 TREML2Q5T2D2 321 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 RUSC1-AS1Q66K80 236 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 SLC2A7Q6PXP3 512 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 LAYNQ6UX15 382 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 TMEM108Q6UXF1 575 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 Q6ZWC4 215 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 PNLDC1Q8NA58 520 aaKnown RBP2.99□□□□□ -1.93
LRCH3-209ENST00000452660 SOCS4Q8WXH5 440 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 KAT5Q92993 513 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 RITA1Q96K30 269 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 ZC3H10Q96K80 434 aaKnown RBP2.99□□□□□ -1.93
LRCH3-209ENST00000452660 C5orf34Q96MH7 638 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 SPRTNQ9H040 489 aaPredicted RBP2.99□□□□□ -1.93
LRCH3-209ENST00000452660 GLOD4Q9HC38 313 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.99□□□□□ -1.93
LRCH3-209ENST00000452660 FEZ2Q9UHY8 353 aaPredicted RBP2.99□□□□□ -1.93
LRCH3-209ENST00000452660 SPEF1Q9Y4P9 236 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 PCDHGA9Q9Y5G4 932 aaKnown RBP2.99□□□□□ -1.93
LRCH3-209ENST00000452660 PCDHGA8Q9Y5G5 932 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 PCDHGA7Q9Y5G6 932 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 PCDHGA6Q9Y5G7 932 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 PCDHGA3Q9Y5H0 932 aa2.99□□□□□ -1.93
LRCH3-209ENST00000452660 PRR23D1E9PI22 279 aaPredicted RBP2.98□□□□□ -1.93
LRCH3-209ENST00000452660 M0R3H8 397 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 A1BGP04217 495 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 PRR23D2P0DMB1 279 aaPredicted RBP2.98□□□□□ -1.93
LRCH3-209ENST00000452660 MYCLP12524 364 aaPredicted RBP2.98□□□□□ -1.93
LRCH3-209ENST00000452660 PHKG2P15735 406 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 ATP5F1P24539 256 aaPredicted RBP2.98□□□□□ -1.93
LRCH3-209ENST00000452660 LRPAP1P30533 357 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 LIPAP38571 399 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 IARSP41252 1262 aaKnown RBP2.98□□□□□ -1.93
LRCH3-209ENST00000452660 ZNF134P52741 427 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 TPTEP56180 551 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 SATB1Q01826 763 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 NOGQ13253 232 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 E2F2Q14209 437 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 IQCB1Q15051 598 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 ZNF260Q3ZCT1 412 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 LONRF3Q496Y0 759 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 AMOTQ4VCS5 1084 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 C10orf25Q5T742 122 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 EFCAB2Q5VUJ9 269 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 MIS18BP1Q6P0N0 1132 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 KIRREL2Q6UWL6 708 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 PRR18Q8N4B5 295 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.98□□□□□ -1.93
LRCH3-209ENST00000452660 FBXO41Q8TF61 875 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 FYTTD1Q96QD9 318 aaKnown RBP2.98□□□□□ -1.93
LRCH3-209ENST00000452660 SCAF8Q9UPN6 1271 aaKnown RBP2.98□□□□□ -1.93
LRCH3-209ENST00000452660 SHOC2Q9UQ13 582 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 SSX2IPQ9Y2D8 614 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 PLEKHM1Q9Y4G2 1056 aa2.98□□□□□ -1.93
LRCH3-209ENST00000452660 IGKV2D-30A0A075B6S6 120 aa2.97□□□□□ -1.93
LRCH3-209ENST00000452660 A1L4Q6 167 aa2.97□□□□□ -1.93
LRCH3-209ENST00000452660 EME2A4GXA9 379 aaPredicted RBP2.97□□□□□ -1.93
LRCH3-209ENST00000452660 FAM90A8PA6NJQ4 464 aa2.97□□□□□ -1.93
LRCH3-209ENST00000452660 GABRDO14764 452 aa2.97□□□□□ -1.93
LRCH3-209ENST00000452660 DSCR3O14972 297 aa2.97□□□□□ -1.93
LRCH3-209ENST00000452660 XPOTO43592 962 aaKnown RBP2.97□□□□□ -1.93
LRCH3-209ENST00000452660 FAM90A13PP0C7W8 464 aa2.97□□□□□ -1.93
LRCH3-209ENST00000452660 FAM90A24PP0C7X0 464 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms