RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 SPA17Q15506 151 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 TRADDQ15628 312 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 ZNF174Q15697 407 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 NAB2Q15742 525 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 PRSS53Q2L4Q9 553 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 RRP12Q5JTH9 1297 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 RNF187Q5TA31 235 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 CENPPQ6IPU0 288 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 MIS18BP1Q6P0N0 1132 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 ZNF585AQ6P3V2 769 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 PDXDC1Q6P996 788 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 FAM43BQ6ZT52 329 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 BZW1Q7L1Q6 419 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 FAM114A1Q8IWE2 563 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 CACNA2D3Q8IZS8 1091 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 USP38Q8NB14 1042 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 LMBR1Q8WVP7 490 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 ATXN2LQ8WWM7 1075 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 STAMQ92783 540 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 P2RX5Q93086 422 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 KISS1RQ969F8 398 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 CCDC47Q96A33 483 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 LRRC45Q96CN5 670 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 HVCN1Q96D96 273 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 CCDC42Q96M95 316 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 ZNF570Q96NI8 536 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 SORCS2Q96PQ0 1159 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 ALS2CR12Q96Q35 445 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 XPO6Q96QU8 1125 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 C7orf25Q9BPX7 421 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 TMEM109Q9BVC6 243 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 IFIH1Q9BYX4 1025 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 FAM129AQ9BZQ8 928 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 CUEDC2Q9H467 287 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 CNOT10Q9H9A5 744 aaKnown RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 SLC39A2Q9NP94 309 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 SLC5A4Q9NY91 659 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 SRRDQ9UH36 339 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 FBXL7Q9UJT9 491 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 NENFQ9UMX5 172 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 COA3Q9Y2R0 106 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 EID1Q9Y6B2 187 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 RTL9Q8NET4 1388 aa4.48□□□□□ -1.69
HMGB3P22-202ENST00000451823 FLT1P17948 1338 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 AFF2P51816 1311 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 TNS3Q68CZ2 1445 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 TCRBV5S2A0A599 114 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 BICDL2A1A5D9 508 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 F8VZ95 297 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 GCOM1H8Y6P7 765 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 PSMA7O14818 248 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 CYP27B1O15528 508 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 GPR42O15529 346 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 SUV39H1O43463 412 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 AHCYL1O43865 530 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 TLR2O60603 784 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 PPFIA2O75334 1257 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 NEBLO76041 1014 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 DDAH1O94760 285 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 FESP07332 822 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 NUDT17P0C025 328 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 LINGO3P0C6S8 592 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 UQCRFS1P1P0C7P4 283 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 MYZAPP0CAP1 466 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 ZNF28P17035 718 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 XBP1P17861 261 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 GNAT2P19087 354 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 TRIM21P19474 475 aaKnown RBP4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 PRPHP41219 470 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 MMP13P45452 471 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 HMGA2P52926 109 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 RWDD2BP57060 319 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 TROAPQ12815 778 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 CCDC96Q2M329 555 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 SLC5A9Q2M3M2 681 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 GKAP1Q5VSY0 366 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 STEAP3Q658P3 488 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 ANKRD40Q6AI12 368 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 DPY19L2P1Q6NXN4 242 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 CNNM4Q6P4Q7 775 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 TEPPQ6URK8 271 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 C6orf15Q6UXA7 325 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 MFSD6Q6ZSS7 791 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 ARHGEF18Q6ZSZ5 1173 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 TMTC3Q6ZXV5 915 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 SLFN11Q7Z7L1 901 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 NLRP10Q86W26 655 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 APLFQ8IW19 511 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 ZFPM1Q8IX07 1006 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 KBTBD2Q8IY47 623 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 IFNL2Q8IZJ0 200 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 RASGEF1CQ8N431 466 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 CCDC197Q8NCU1 140 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 CCDC26Q8TAB7 109 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 ACTRT1Q8TDG2 376 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 MICAL1Q8TDZ2 1067 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 NSMCE1Q8WV22 266 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 MBD6Q96DN6 1003 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 STAMBPL1Q96FJ0 436 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms