RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 PTPN11Q06124 597 aaPredicted RBP6.98□□□□□ -1.29
USP46-202ENST00000451218 ADCY1Q08828 1119 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 TMEM132DQ14C87 1099 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 DCAF4L1Q3SXM0 396 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 TRIM72Q6ZMU5 477 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 TMEM110Q86TL2 294 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 NLRP7Q8WX94 980 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 ATG4AQ8WYN0 398 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 RPF1Q9H9Y2 349 aaKnown RBP6.98□□□□□ -1.29
USP46-202ENST00000451218 SIGLEC16A6NMB1 481 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 DAPK3O43293 454 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 PSTPIP1O43586 416 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 CEP104O60308 925 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 OAS2P29728 719 aaKnown RBP6.98□□□□□ -1.29
USP46-202ENST00000451218 GUCY2DQ02846 1103 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 JAMLQ86YT9 394 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 FEZF2Q8TBJ5 459 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 HPDLQ96IR7 371 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 ZFP42Q96MM3 310 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 DCLK3Q9C098 648 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 ZNF518BQ9C0D4 1074 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 CCDC66A2RUB6 948 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 SEPT4O43236 478 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 ZEB2O60315 1214 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 CHRM1P11229 460 aaPredicted RBP6.98□□□□□ -1.29
USP46-202ENST00000451218 CYP2C9P11712 490 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 AKR1A1P14550 325 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 CETN1Q12798 172 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 BIRC3Q13489 604 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 CNGA2Q16280 664 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 GLRA4Q5JXX5 417 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 FAM182AQ5T1J6 154 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 TMCO3Q6UWJ1 677 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 KRT222Q8N1A0 295 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 ZMIZ2Q8NF64 920 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 FAF2Q96CS3 445 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.98□□□□□ -1.29
USP46-202ENST00000451218 CTTNBP2NLQ9P2B4 639 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 PRDM4Q9UKN5 801 aa6.98□□□□□ -1.29
USP46-202ENST00000451218 BARX2Q9UMQ3 279 aaPredicted RBP6.98□□□□□ -1.29
USP46-202ENST00000451218 hCG_1818297A0A087WSY0 165 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 CCDC188H7C350 402 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 THAP12O43422 761 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 IPO7O95373 1038 aaKnown RBP6.97□□□□□ -1.29
USP46-202ENST00000451218 CCDC172P0C7W6 258 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 HSD17B3P37058 310 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 COILP38432 576 aaPredicted RBP6.97□□□□□ -1.29
USP46-202ENST00000451218 NOP2P46087 812 aaKnown RBP6.97□□□□□ -1.29
USP46-202ENST00000451218 CPT1AP50416 773 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 LPIN1Q14693 890 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 SURF1Q15526 300 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 CCDC14Q49A88 953 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 ARHGAP17Q68EM7 881 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 CXCL17Q6UXB2 119 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 FAM183BPQ6ZVS7 135 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 CRYBG2Q8N1P7 616 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 LRRC52Q8N7C0 313 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 MCEEQ96PE7 176 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 CYP3A43Q9HB55 503 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 HELZP42694 1942 aaKnown RBP6.97□□□□□ -1.29
USP46-202ENST00000451218 MYO15AQ9UKN7 3530 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 MYO1FO00160 1098 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 PAPSS1O43252 624 aaPredicted RBP6.97□□□□□ -1.29
USP46-202ENST00000451218 SHBGP04278 402 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 CHKAP35790 457 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 MATR3P43243 847 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP46-202ENST00000451218 C8orf74Q6P047 294 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 GORASP1Q9BQQ3 440 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 ELNP15502 786 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 USP8P40818 1118 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 KCNJ1P48048 391 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 EPHB4P54760 987 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 GDF10P55107 478 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 ZNF844Q08AG5 666 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 LRRC38Q5VT99 294 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 EMBQ6PCB8 327 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 DRICH1Q6PGQ1 229 aaPredicted RBP6.97□□□□□ -1.29
USP46-202ENST00000451218 ADAT2Q7Z6V5 191 aaKnown RBP6.97□□□□□ -1.29
USP46-202ENST00000451218 VPS36Q86VN1 386 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 KLHL7Q8IXQ5 586 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 CMASQ8NFW8 434 aaPredicted RBP6.97□□□□□ -1.29
USP46-202ENST00000451218 SLC35B2Q8TB61 432 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 ERP44Q9BS26 406 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 VNN2O95498 520 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 HMGCRP04035 888 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 ITGB1P05556 798 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 AXLP30530 894 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 PGFP49763 221 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 MRPS6P82932 125 aaKnown RBP6.97□□□□□ -1.29
USP46-202ENST00000451218 RAB41Q5JT25 222 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 MFSD7Q6UXD7 560 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 GPRIN1Q7Z2K8 1008 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 HDXQ7Z353 690 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 TXLNBQ8N3L3 684 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 ACSF2Q96CM8 615 aaPredicted RBP6.97□□□□□ -1.29
USP46-202ENST00000451218 ACAP3Q96P50 834 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 FAM117AQ9C073 453 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 FAM49AQ9H0Q0 323 aaPredicted RBP6.97□□□□□ -1.29
USP46-202ENST00000451218 CRTAC1Q9NQ79 661 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 KLHL11Q9NVR0 708 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms