RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 C2orf42Q9NWW7 574 aa29.1■■■□□ 2.25
USP42-204ENST00000451154 CUTAO60888 179 aa29.09■■■□□ 2.25
USP42-204ENST00000451154 ATP2C2O75185 946 aa29.09■■■□□ 2.25
USP42-204ENST00000451154 TNNC2P02585 160 aa29.09■■■□□ 2.25
USP42-204ENST00000451154 DDX6P26196 483 aaKnown RBP eCLIP29.09■■■□□ 2.25
USP42-204ENST00000451154 MYO1EQ12965 1108 aa29.09■■■□□ 2.25
USP42-204ENST00000451154 TRIM68Q6AZZ1 485 aa29.09■■■□□ 2.25
USP42-204ENST00000451154 MON1AQ86VX9 555 aa29.09■■■□□ 2.25
USP42-204ENST00000451154 RDH13Q8NBN7 331 aa29.09■■■□□ 2.25
USP42-204ENST00000451154 ZNF507Q8TCN5 953 aa29.09■■■□□ 2.25
USP42-204ENST00000451154 OBSL1O75147 1896 aa29.08■■■□□ 2.25
USP42-204ENST00000451154 CHURC1-FNTBB4DL54 471 aa29.08■■■□□ 2.25
USP42-204ENST00000451154 YEATS4O95619 227 aa29.08■■■□□ 2.25
USP42-204ENST00000451154 LMO2P25791 158 aa29.08■■■□□ 2.25
USP42-204ENST00000451154 PCSK1P29120 753 aa29.08■■■□□ 2.25
USP42-204ENST00000451154 FNTBP49356 437 aa29.08■■■□□ 2.25
USP42-204ENST00000451154 SURF1Q15526 300 aa29.08■■■□□ 2.25
USP42-204ENST00000451154 RSPO4Q2I0M5 234 aaPredicted RBP29.08■■■□□ 2.25
USP42-204ENST00000451154 EPM2AIP1Q7L775 607 aaPredicted RBP29.08■■■□□ 2.25
USP42-204ENST00000451154 SPATA2LQ8IUW3 424 aaPredicted RBP29.08■■■□□ 2.25
USP42-204ENST00000451154 SCN4BQ8IWT1 228 aa29.08■■■□□ 2.25
USP42-204ENST00000451154 SPATA18Q8TC71 538 aa29.08■■■□□ 2.25
USP42-204ENST00000451154 EBF3Q9H4W6 596 aa29.08■■■□□ 2.25
USP42-204ENST00000451154 HPS4Q9NQG7 708 aa29.08■■■□□ 2.25
USP42-204ENST00000451154 NOL4O94818 638 aa29.07■■■□□ 2.24
USP42-204ENST00000451154 HOXC13P31276 330 aa29.07■■■□□ 2.24
USP42-204ENST00000451154 RUNX3Q13761 415 aa29.07■■■□□ 2.24
USP42-204ENST00000451154 CCINQ13939 588 aa29.07■■■□□ 2.24
USP42-204ENST00000451154 PUM1Q14671 1186 aaKnown RBP eCLIP29.07■■■□□ 2.24
USP42-204ENST00000451154 FAM171BQ6P995 826 aa29.07■■■□□ 2.24
USP42-204ENST00000451154 DGLUCYQ7Z3D6 616 aa29.07■■■□□ 2.24
USP42-204ENST00000451154 LIMS2Q7Z4I7 341 aa29.07■■■□□ 2.24
USP42-204ENST00000451154 RIN3Q8TB24 985 aa29.07■■■□□ 2.24
USP42-204ENST00000451154 KBTBD7Q8WVZ9 684 aa29.07■■■□□ 2.24
USP42-204ENST00000451154 C7orf25Q9BPX7 421 aa29.07■■■□□ 2.24
USP42-204ENST00000451154 OTOL1A6NHN0 477 aaPredicted RBP29.06■■■□□ 2.24
USP42-204ENST00000451154 K7ESF4 209 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 EIF3DO15371 548 aaKnown RBP eCLIP29.06■■■□□ 2.24
USP42-204ENST00000451154 TGFB1I1O43294 461 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 HRO43593 1189 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 TADA3O75528 432 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 PDGFRBP09619 1106 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 CASP1P29466 404 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 CFAP221Q4G0U5 840 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 FAM26FQ5R3K3 315 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 HEATR6Q6AI08 1181 aaKnown RBP29.06■■■□□ 2.24
USP42-204ENST00000451154 CNNM4Q6P4Q7 775 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 DPH6Q7L8W6 267 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 SNX21Q969T3 373 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 MYRFLQ96LU7 910 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 CYP2S1Q96SQ9 504 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 KIAA1586Q9HCI6 787 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 UXTQ9UBK9 157 aaPredicted RBP29.06■■■□□ 2.24
USP42-204ENST00000451154 RAB23Q9ULC3 237 aa29.06■■■□□ 2.24
USP42-204ENST00000451154 SDK1Q7Z5N4 2213 aa29.05■■■□□ 2.24
USP42-204ENST00000451154 SOBPA7XYQ1 873 aa29.05■■■□□ 2.24
USP42-204ENST00000451154 CLIC2O15247 247 aa29.05■■■□□ 2.24
USP42-204ENST00000451154 POLR2DO15514 142 aaKnown RBP29.05■■■□□ 2.24
USP42-204ENST00000451154 PSMC1P62191 440 aaKnown RBP29.05■■■□□ 2.24
USP42-204ENST00000451154 PRR23BQ6ZRT6 265 aa29.05■■■□□ 2.24
USP42-204ENST00000451154 NELFCDQ8IXH7 590 aa29.05■■■□□ 2.24
USP42-204ENST00000451154 GPR161Q8N6U8 529 aaKnown RBP29.05■■■□□ 2.24
USP42-204ENST00000451154 TRMT2BQ96GJ1 504 aaKnown RBP29.05■■■□□ 2.24
USP42-204ENST00000451154 SYT15Q9BQS2 421 aa29.05■■■□□ 2.24
USP42-204ENST00000451154 TRPC7Q9HCX4 862 aa29.05■■■□□ 2.24
USP42-204ENST00000451154 AGPAT3Q9NRZ7 376 aa29.05■■■□□ 2.24
USP42-204ENST00000451154 DLL3Q9NYJ7 618 aa29.05■■■□□ 2.24
USP42-204ENST00000451154 GMEB2Q9UKD1 530 aa29.05■■■□□ 2.24
USP42-204ENST00000451154 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.04■■■□□ 2.24
USP42-204ENST00000451154 CST3P01034 146 aaPredicted RBP29.04■■■□□ 2.24
USP42-204ENST00000451154 DLATP10515 647 aaKnown RBP29.04■■■□□ 2.24
USP42-204ENST00000451154 ARSAP15289 507 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 TGM1P22735 817 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 CYP2J2P51589 502 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 SRSF5Q13243 272 aaKnown RBP29.04■■■□□ 2.24
USP42-204ENST00000451154 SNRNP35Q16560 246 aaKnown RBP29.04■■■□□ 2.24
USP42-204ENST00000451154 CC2D1AQ6P1N0 951 aaPredicted RBP29.04■■■□□ 2.24
USP42-204ENST00000451154 TRAPPC11Q7Z392 1133 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 WDR49Q8IV35 697 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 SYNPOQ8N3V7 929 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 TTC16Q8NEE8 873 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 SCFD1Q8WVM8 642 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 FUBP3Q96I24 572 aaKnown RBP eCLIP29.04■■■□□ 2.24
USP42-204ENST00000451154 SLC22A12Q96S37 553 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 MMS19Q96T76 1030 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 BLZF1Q9H2G9 400 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 KIF9Q9HAQ2 790 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 CRTAC1Q9NQ79 661 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 MAGEC2Q9UBF1 373 aaPredicted RBP29.04■■■□□ 2.24
USP42-204ENST00000451154 CDH9Q9ULB4 789 aa29.04■■■□□ 2.24
USP42-204ENST00000451154 PAPSS2O95340 614 aaPredicted RBP29.03■■■□□ 2.24
USP42-204ENST00000451154 SIM2Q14190 667 aaPredicted RBP29.03■■■□□ 2.24
USP42-204ENST00000451154 CCDC127Q96BQ5 260 aa29.03■■■□□ 2.24
USP42-204ENST00000451154 CHFRQ96EP1 664 aa29.03■■■□□ 2.24
USP42-204ENST00000451154 PARD6AQ9NPB6 346 aa29.03■■■□□ 2.24
USP42-204ENST00000451154 USP18Q9UMW8 372 aa29.03■■■□□ 2.24
USP42-204ENST00000451154 ANAPC1Q9H1A4 1944 aa29.02■■■□□ 2.24
USP42-204ENST00000451154 ZSCAN22P10073 491 aaPredicted RBP29.02■■■□□ 2.24
USP42-204ENST00000451154 TNNI1P19237 187 aa29.02■■■□□ 2.24
USP42-204ENST00000451154 BDNFP23560 247 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms