RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PCED1BQ96HM7 432 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 FAM81BQ96LP2 452 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 B3GNT5Q9BYG0 378 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 GPR88Q9GZN0 384 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 CYP4F11Q9HBI6 524 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 NLRC4Q9NPP4 1024 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 CLEC1BQ9P126 229 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 CNTN6Q9UQ52 1028 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 SLC27A5Q9Y2P5 690 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 PCDHB5Q9Y5E4 795 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 A0A1W2PQJ5 194 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 FOXN3O00409 490 aaPredicted RBP13.85□□□□□ -0.19
VPS33A-202ENST00000451053 PRRG1O14668 218 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 NCK2O43639 380 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 RFPL2O75678 378 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 SOAT2O75908 522 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 C8AP07357 584 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 CYP2F1P24903 491 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 ELF1P32519 619 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 USP8P40818 1118 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 SMARCB1Q12824 385 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 TBX2Q13207 712 aaPredicted RBP13.85□□□□□ -0.19
VPS33A-202ENST00000451053 SKIV2LQ15477 1246 aaKnown RBP13.85□□□□□ -0.19
VPS33A-202ENST00000451053 MAPRE1Q15691 268 aaKnown RBP13.85□□□□□ -0.19
VPS33A-202ENST00000451053 LIN9Q5TKA1 542 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 ANKRD54Q6NXT1 300 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 PAQR9Q6ZVX9 377 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 SPATA2LQ8IUW3 424 aaPredicted RBP13.85□□□□□ -0.19
VPS33A-202ENST00000451053 TCEAL8Q8IYN2 117 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 FUKQ8N0W3 1084 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 C12orf76Q8N812 135 aaPredicted RBP13.85□□□□□ -0.19
VPS33A-202ENST00000451053 ZNF397Q8NF99 534 aaPredicted RBP13.85□□□□□ -0.19
VPS33A-202ENST00000451053 SPPL2BQ8TCT7 592 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 C2orf15Q8WU43 125 aaKnown RBP13.85□□□□□ -0.19
VPS33A-202ENST00000451053 HDAC7Q8WUI4 952 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 HEXIM2Q96MH2 286 aaKnown RBP13.85□□□□□ -0.19
VPS33A-202ENST00000451053 ZNF518BQ9C0D4 1074 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 PLEKHA4Q9H4M7 779 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 DZANK1Q9NVP4 752 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 YIPF1Q9Y548 306 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 INSL5Q9Y5Q6 135 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 CDH23Q9H251 3354 aa13.85□□□□□ -0.19
VPS33A-202ENST00000451053 F8VZ95 297 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 NRDCO43847 1150 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 ZMYND10O75800 440 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 PAEPP09466 180 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 SRGAP2BP0DMP2 458 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 HAPLN1P10915 354 aaPredicted RBP13.84□□□□□ -0.19
VPS33A-202ENST00000451053 CD19P15391 556 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 BDNFP23560 247 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 ADORA2BP29275 332 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 GPR15P49685 360 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 JAM2P57087 298 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 CFAP221Q4G0U5 840 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 SYCE2Q6PIF2 218 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 C4orf50Q6ZRC1 276 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 CCDC149Q6ZUS6 474 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 CACNA2D4Q7Z3S7 1137 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 FAM35AQ86V20 835 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 GPIHBP1Q8IV16 184 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 FMNL3Q8IVF7 1028 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 SLC2A14Q8TDB8 520 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 TFAP2BQ92481 460 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 FUBP3Q96I24 572 aaKnown RBP eCLIP13.84□□□□□ -0.19
VPS33A-202ENST00000451053 SEPT5Q99719 369 aaPredicted RBP13.84□□□□□ -0.19
VPS33A-202ENST00000451053 ZSWIM1Q9BR11 485 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 MED10Q9BTT4 135 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 APOL5Q9BWW9 433 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 STK33Q9BYT3 514 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 NUCKS1Q9H1E3 243 aaKnown RBP13.84□□□□□ -0.19
VPS33A-202ENST00000451053 UBE2ZQ9H832 354 aaPredicted RBP13.84□□□□□ -0.19
VPS33A-202ENST00000451053 ABCB6Q9NP58 842 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 ACP6Q9NPH0 428 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 TMEM30AQ9NV96 361 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 CEP72Q9P209 647 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 MAFFQ9ULX9 164 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 CAPN11Q9UMQ6 739 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 LUC7L2Q9Y383 392 aaKnown RBP13.84□□□□□ -0.19
VPS33A-202ENST00000451053 SZT2Q5T011 3432 aa13.84□□□□□ -0.19
VPS33A-202ENST00000451053 MTCL1Q9Y4B5 1905 aaKnown RBP13.84□□□□□ -0.19
VPS33A-202ENST00000451053 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 AKR1B15C9JRZ8 316 aaPredicted RBP13.83□□□□□ -0.2
VPS33A-202ENST00000451053 CYP26A1O43174 497 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 GYPCP04921 128 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 ATF6P18850 670 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 BRD2P25440 801 aaKnown RBP13.83□□□□□ -0.2
VPS33A-202ENST00000451053 CACNA2D1P54289 1103 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 TSR1Q2NL82 804 aaKnown RBP13.83□□□□□ -0.2
VPS33A-202ENST00000451053 MGAT5BQ3V5L5 792 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 PPM1LQ5SGD2 360 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 RARS2Q5T160 578 aaKnown RBP13.83□□□□□ -0.2
VPS33A-202ENST00000451053 PPP1R26Q5T8A7 1209 aaPredicted RBP13.83□□□□□ -0.2
VPS33A-202ENST00000451053 ARHGAP17Q68EM7 881 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 FAM71AQ8IYT1 594 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 CYFIP2Q96F07 1278 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 MSLNLQ96KJ4 702 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 SPAG5Q96R06 1193 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 HNRNPABQ99729 332 aaKnown RBP13.83□□□□□ -0.2
VPS33A-202ENST00000451053 TTYH3Q9C0H2 523 aa13.83□□□□□ -0.2
VPS33A-202ENST00000451053 DNAI2Q9GZS0 605 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms