RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 ABCB6Q9NP58 842 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TDP1Q9NUW8 608 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 INTS13Q9NVM9 706 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 C2orf42Q9NWW7 574 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 DLL3Q9NYJ7 618 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 USP18Q9UMW8 372 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 KIF26AQ9ULI4 1882 aaPredicted RBP17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 DENND4CQ5VZ89 1909 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SPTBN2O15020 2390 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TNNC2P02585 160 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 DDX6P26196 483 aaKnown RBP eCLIP17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 PCSK1P29120 753 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 AMPD3Q01432 767 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 MYO1EQ12965 1108 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 RUNX3Q13761 415 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CCINQ13939 588 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SIM2Q14190 667 aaPredicted RBP17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 FOXD4L6Q3SYB3 417 aaPredicted RBP17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TRIM68Q6AZZ1 485 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ATL3Q6DD88 541 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 FOXD4L3Q6VB84 417 aaPredicted RBP17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 MON1AQ86VX9 555 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SCN4BQ8IWT1 228 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TTC16Q8NEE8 873 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 HPDLQ96IR7 371 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 PKMYT1Q99640 499 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TRIM9Q9C026 710 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 KBTBD4Q9NVX7 518 aa17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 UXTQ9UBK9 157 aaPredicted RBP17.78■□□□□ 0.44
RAB11FIP3-204ENST00000449879 PTPRJQ12913 1337 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 MED19A0JLT2 244 aaPredicted RBP17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 K7ESF4 209 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 GABRDO14764 452 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 HRO43593 1189 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 PPP6R2O75170 966 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ATP2C2O75185 946 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 HOXC13P31276 330 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 HOXD13P35453 343 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ASIC1P78348 528 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SRSF5Q13243 272 aaKnown RBP17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SURF1Q15526 300 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 E2F4Q16254 413 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 DUOXA2Q1HG44 320 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CC2D1AQ6P1N0 951 aaPredicted RBP17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SYNPOQ8N3V7 929 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 RDH13Q8NBN7 331 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SPATA18Q8TC71 538 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CYP2S1Q96SQ9 504 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CUEDC2Q9H467 287 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TRPC7Q9HCX4 862 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 HPS4Q9NQG7 708 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 HSPBP1Q9NZL4 362 aa17.77■□□□□ 0.44
RAB11FIP3-204ENST00000449879 OTOL1A6NHN0 477 aaPredicted RBP17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 SOBPA7XYQ1 873 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 NOL4O94818 638 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 PDGFRBP09619 1106 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 ARSAP15289 507 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 TGM1P22735 817 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 LMO2P25791 158 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 SPEM2Q0P670 501 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 CFAP221Q4G0U5 840 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 LAIR1Q6GTX8 287 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 DPH6Q7L8W6 267 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 LONP2Q86WA8 852 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 IQUBQ8NA54 791 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 RIN3Q8TB24 985 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 MYRFLQ96LU7 910 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 KIF9Q9HAQ2 790 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 PARD6AQ9NPB6 346 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 CFAP45Q9UL16 551 aa17.76■□□□□ 0.43
RAB11FIP3-204ENST00000449879 CUTAO60888 179 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 TADA3O75528 432 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 PAPSS2O95340 614 aaPredicted RBP17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 PSMC1P62191 440 aaKnown RBP17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 LMNB2Q03252 620 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 GRSF1Q12849 480 aaKnown RBP eCLIP17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 FAM26FQ5R3K3 315 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 FAM171BQ6P995 826 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 SHC4Q6S5L8 630 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 C4orf50Q6ZRC1 276 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 ZNF507Q8TCN5 953 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 KBTBD7Q8WVZ9 684 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 TRMT2BQ96GJ1 504 aaKnown RBP17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 FUBP3Q96I24 572 aaKnown RBP eCLIP17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 SLC22A12Q96S37 553 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 MMS19Q96T76 1030 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 SYT15Q9BQS2 421 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 KIAA1586Q9HCI6 787 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 MAGEC2Q9UBF1 373 aaPredicted RBP17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 ZDHHC9Q9Y397 364 aa17.75■□□□□ 0.43
RAB11FIP3-204ENST00000449879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.74■□□□□ 0.43
RAB11FIP3-204ENST00000449879 PRR5-ARHGAP8B1AHC4 643 aa17.74■□□□□ 0.43
RAB11FIP3-204ENST00000449879 CLIC2O15247 247 aa17.74■□□□□ 0.43
RAB11FIP3-204ENST00000449879 EIF3DO15371 548 aaKnown RBP eCLIP17.74■□□□□ 0.43
RAB11FIP3-204ENST00000449879 RETP07949 1114 aa17.74■□□□□ 0.43
RAB11FIP3-204ENST00000449879 DLATP10515 647 aaKnown RBP17.74■□□□□ 0.43
RAB11FIP3-204ENST00000449879 TNNI1P19237 187 aa17.74■□□□□ 0.43
RAB11FIP3-204ENST00000449879 SDHBP21912 280 aa17.74■□□□□ 0.43
RAB11FIP3-204ENST00000449879 CNR2P34972 360 aa17.74■□□□□ 0.43
RAB11FIP3-204ENST00000449879 CYP2J2P51589 502 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms