RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 SKOR1P84550 965 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 CALCOCO2Q13137 446 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 PIGHQ14442 188 aaPredicted RBP16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 KCNA10Q16322 511 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 DEFB115Q30KQ5 88 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 ATP13A4Q4VNC1 1196 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 TAF2Q6P1X5 1199 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 ANKS1BQ7Z6G8 1248 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 SESTD1Q86VW0 696 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 SMG8Q8ND04 991 aaKnown RBP16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 GRK7Q8WTQ7 553 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 RNF25Q96BH1 459 aaPredicted RBP16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 HEXIM2Q96MH2 286 aaKnown RBP16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 MRPL45Q9BRJ2 306 aaKnown RBP16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 OSBPL7Q9BZF2 842 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 PABPC3Q9H361 631 aaKnown RBP16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 KLHL11Q9NVR0 708 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 DERAQ9Y315 318 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 IPPQ9Y573 584 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 SNX9Q9Y5X1 595 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 CASP8AP2Q9UKL3 1982 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 SMIM28A0A1B0GU29 152 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 GAS8O95995 478 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 NR1D1P20393 614 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 CETN2P41208 172 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 NFX1Q12986 1120 aaKnown RBP16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 ZFYVE27Q5T4F4 411 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 LRRC38Q5VT99 294 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 LRRC31Q6UY01 552 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 KDM7AQ6ZMT4 941 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 BEST2Q8NFU1 509 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 ATL2Q8NHH9 583 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 FAM129AQ9BZQ8 928 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 EPB41L4BQ9H329 900 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 GOLGA2P5Q9HBQ8 144 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 BARX2Q9UMQ3 279 aaPredicted RBP16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 TRPA1O75762 1119 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 MICAL2O94851 1124 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 STAU1O95793 577 aaKnown RBP16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 ATP1A2P50993 1020 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 IRAK1P51617 712 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 EIF3BP55884 814 aaKnown RBP16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 IFFO1Q0D2I5 559 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 MYO1EQ12965 1108 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 CCNG2Q16589 344 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 EMC10Q5UCC4 262 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 TWF2Q6IBS0 349 aaKnown RBP16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 SYDE1Q6ZW31 735 aaPredicted RBP16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 RCOR2Q8IZ40 523 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 NIPA2Q8N8Q9 360 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 CD99L2Q8TCZ2 262 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 RBM41Q96IZ5 413 aaKnown RBP16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 CCDC114Q96M63 670 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 ASIC3Q9UHC3 531 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 NME7Q9Y5B8 376 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 PI4K2BG5E9Z4 385 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 GOLGA8SH3BPF8 625 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 CHRNA1P02708 482 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 KRT3P12035 628 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 CYP3A5P20815 502 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 RFC1P35251 1148 aaPredicted RBP16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 SOX4Q06945 474 aaPredicted RBP16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 INCA1Q0VD86 236 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 C9orf57Q5W0N0 161 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 C12orf29Q8N999 325 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 UBA3Q8TBC4 463 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 CPXM1Q96SM3 734 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 FAM118BQ9BPY3 351 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 WHRNQ9P202 907 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 TRPV2Q9Y5S1 764 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 GRIN2DO15399 1336 aa16.97■□□□□ 0.31
AP000253.1-201ENST00000449339 SIGLEC16A6NMB1 481 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 A6NNZ2 444 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 MEIS3P2A8K0S8 358 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 M0QYV0 167 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 TP73O15350 636 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 HCRTO43612 131 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 TOMM70O94826 608 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 KRT1P04264 644 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 NUDT17P0C025 328 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 PSMC1P62191 440 aaKnown RBP16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 GNGT1P63211 74 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 PTK6Q13882 451 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 KRT71Q3SY84 523 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 TUBB8Q3ZCM7 444 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 DENND2CQ68D51 928 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 TTC19Q6DKK2 380 aaPredicted RBP16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 SLITRK1Q96PX8 696 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 SYNCQ9H7C4 482 aa16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.96■□□□□ 0.31
AP000253.1-201ENST00000449339 M0QZ92 97 aa16.96■□□□□ 0.3
AP000253.1-201ENST00000449339 ADCY2Q08462 1091 aa16.96■□□□□ 0.3
AP000253.1-201ENST00000449339 SLMAPQ14BN4 828 aa16.96■□□□□ 0.3
AP000253.1-201ENST00000449339 TXNRD3NBQ6F5E7 133 aa16.96■□□□□ 0.3
AP000253.1-201ENST00000449339 MFSD7Q6UXD7 560 aa16.96■□□□□ 0.3
AP000253.1-201ENST00000449339 SERINC5Q86VE9 423 aa16.96■□□□□ 0.3
AP000253.1-201ENST00000449339 LPIN3Q9BQK8 851 aa16.96■□□□□ 0.3
AP000253.1-201ENST00000449339 SEMA4AQ9H3S1 761 aa16.96■□□□□ 0.3
AP000253.1-201ENST00000449339 UBQLN1Q9UMX0 589 aaKnown RBP16.96■□□□□ 0.3
AP000253.1-201ENST00000449339 ST3GAL5Q9UNP4 418 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms