RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 RNF207Q6ZRF8 634 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 RHOUQ7L0Q8 258 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 AACSQ86V21 672 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CCNJLQ8IV13 435 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MICALL2Q8IY33 904 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CHPFQ8IZ52 775 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 RILPQ96NA2 401 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MED15Q96RN5 788 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 BEGAINQ9BUH8 593 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MLPHQ9BV36 600 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 CINPQ9BW66 212 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 FRMD8P1Q9BZ68 369 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 SUGCTQ9HAC7 445 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TRPC5Q9UL62 973 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 ADGRB2O60241 1585 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ABCA8O94911 1581 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 A0A1W2PP64 1363 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PSIP1O75475 530 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 IL1BP01584 269 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 SRGNP10124 158 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CDH2P19022 906 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 NMT1P30419 496 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 HAND2P61296 217 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 C2orf54Q08AI8 447 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 RBM44Q6ZP01 1051 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 KRT77Q7Z794 578 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TREML1Q86YW5 311 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ANKS1AQ92625 1134 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TMCO6Q96DC7 493 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PSD2Q9BQI7 771 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 KATNAL1Q9BW62 490 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MKRN2Q9H000 416 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 CNNM1Q9NRU3 951 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 KLHL20Q9Y2M5 609 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TDRD9Q8NDG6 1382 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 GTPBP10A4D1E9 387 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 PTTG1O95997 202 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 HLA-DRAP01903 254 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 RARAP10276 462 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MAGEA10P43363 369 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 POLR2FP61218 127 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 EHHADHQ08426 723 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MAPK7Q13164 816 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ATP1A4Q13733 1029 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 EFTUD2Q15029 972 aaKnown RBP eCLIP3.04□□□□□ -1.924e-7■■■■□ 24.8
CHD9-203ENST00000447540 C12orf60Q5U649 245 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TYW1BQ6NUM6 668 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CORO6Q6QEF8 472 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 KIAA0408Q6ZU52 694 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 BEND4Q6ZU67 534 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ARPINQ7Z6K5 226 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 LSMEM1Q8N8F7 131 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ATAD1Q8NBU5 361 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PLEKHA8Q96JA3 519 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 SLX1AQ9BQ83 275 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MRPL9Q9BYD2 267 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 SUGT1Q9Y2Z0 365 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CDY2AQ9Y6F7 541 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CDY1Q9Y6F8 540 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ARHGAP5Q13017 1502 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ARHGEF37A1IGU5 675 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 BTBD11A6QL63 1104 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 MEI4A8MW99 385 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 NMT2O60551 498 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 IFNAR1P17181 557 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SYN1P17600 705 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TMBIM6P55061 237 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 LGALS3BPQ08380 585 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 CDC16Q13042 620 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SLC2A7Q6PXP3 512 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 CCDC36Q8IYA8 594 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SIX5Q8N196 739 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 LRRC20Q8TCA0 184 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 VPS39Q96JC1 886 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SMARCAD1Q9H4L7 1026 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 EFCAB1Q9HAE3 211 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TUFT1Q9NNX1 390 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 GPR108Q9NPR9 543 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 MAT2BQ9NZL9 334 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 CEP72Q9P209 647 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 NYAP2Q9P242 653 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 MAN1B1Q9UKM7 699 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SCN9AQ15858 1988 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 KPNA5O15131 536 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 GATCO43716 136 aaKnown RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 MRPS14O60783 128 aaKnown RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 CAMTA2O94983 1202 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 RAB4AP20338 218 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 NAMPTP43490 491 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 RASSF7Q02833 373 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 GRM2Q14416 872 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 NAB2Q15742 525 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SH3D19Q5HYK7 790 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 MDH1BQ5I0G3 518 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SPANXN2Q5MJ10 180 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 AGAP7PQ5VUJ5 663 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 METTL2BQ6P1Q9 378 aaKnown RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 TRIM69Q86WT6 500 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ELMOD1Q8N336 334 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SVOPQ8N4V2 548 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms