RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 NUMBLQ9Y6R0 609 aa17.46■□□□□ 0.39
SF3A1-204ENST00000447376 MYBPHLA2RUH7 354 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 TRIM66O15016 1216 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 CYP2F1P24903 491 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 GABRR2P28476 465 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 GRIK1P39086 918 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 PRSS36Q5K4E3 855 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 UNC93AQ86WB7 457 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 B3GALNT2Q8NCR0 500 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 FAXDC2Q96IV6 333 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 CEP295NLQ96MC4 621 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 MED10Q9BTT4 135 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 ELOVL4Q9GZR5 314 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 DNAJC25Q9H1X3 360 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 ATXN3LQ9H3M9 355 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 CYP3A43Q9HB55 503 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 RAB20Q9NX57 234 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 ZMYM5Q9UJ78 669 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 MAGED2Q9UNF1 606 aaPredicted RBP17.45■□□□□ 0.38
SF3A1-204ENST00000447376 DUSP12Q9UNI6 340 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 MUC3AQ02505 3323 aa17.45■□□□□ 0.38
SF3A1-204ENST00000447376 A0A1W2PRU2 124 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 FAM86C2PA6NEL3 165 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 TMEM221A6NGB7 291 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 ANHXE9PGG2 379 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 M0R296 226 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 HCRTO43612 131 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 ATP2C2O75185 946 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 ATF6P18850 670 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 RFX1P22670 979 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 RAP1GAPP47736 663 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 CDH8P55286 799 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 MCCD1P59942 119 aaPredicted RBP17.44■□□□□ 0.38
SF3A1-204ENST00000447376 HTR4Q13639 388 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 DDR2Q16832 855 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 FAM114A1Q8IWE2 563 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 E2F7Q96AV8 911 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 TCEAL4Q96EI5 215 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 PCED1BQ96HM7 432 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 PKMYT1Q99640 499 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 NAT10Q9H0A0 1025 aaKnown RBP17.44■□□□□ 0.38
SF3A1-204ENST00000447376 MFSD1Q9H3U5 465 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 ZFP14Q9HCL3 533 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 CRTAC1Q9NQ79 661 aa17.44■□□□□ 0.38
SF3A1-204ENST00000447376 DPYSL4O14531 572 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 SRFP11831 508 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 BDNFP23560 247 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 YWHAEP62258 255 aaKnown RBP17.43■□□□□ 0.38
SF3A1-204ENST00000447376 TEAD2Q15562 447 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 SPOPLQ6IQ16 392 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 PARM1Q6UWI2 310 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 CREBRFQ8IUR6 639 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 SUGP1Q8IWZ8 645 aaKnown RBP17.43■□□□□ 0.38
SF3A1-204ENST00000447376 SLC44A3Q8N4M1 653 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 GPR152Q8TDT2 470 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 RSAD2Q8WXG1 361 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 SLC35C1Q96A29 364 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 PBXIP1Q96AQ6 731 aa17.43■□□□□ 0.38
SF3A1-204ENST00000447376 FAM124BQ9H5Z6 455 aaPredicted RBP17.43■□□□□ 0.38
SF3A1-204ENST00000447376 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.43■□□□□ 0.386e-7■■■■■ 66.6
SF3A1-204ENST00000447376 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.43■□□□□ 0.38
SF3A1-204ENST00000447376 ECI2O75521 394 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 CD58P19256 250 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 CCR2P41597 374 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 ASPAP45381 313 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 NDST1P52848 882 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 TMC8Q8IU68 726 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 SHKBP1Q8TBC3 707 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 MRPS31Q92665 395 aaKnown RBP17.42■□□□□ 0.38
SF3A1-204ENST00000447376 FGF14Q92915 247 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 SMARCD2Q92925 531 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 KXD1Q9BQD3 176 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 LRFN3Q9BTN0 628 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 NT5C1AQ9BXI3 368 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 BCO2Q9BYV7 579 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 DPEP3Q9H4B8 488 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 THAP9Q9H5L6 903 aa17.42■□□□□ 0.38
SF3A1-204ENST00000447376 SLC38A8A6NNN8 435 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 P4HA2O15460 535 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 GJA1P17302 382 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 DDX6P26196 483 aaKnown RBP eCLIP17.41■□□□□ 0.38
SF3A1-204ENST00000447376 FMO5P49326 533 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 MARSP56192 900 aaKnown RBP17.41■□□□□ 0.38
SF3A1-204ENST00000447376 PFKPQ01813 784 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 TYRO3Q06418 890 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 GPR158Q5T848 1215 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 DENND5BQ6ZUT9 1274 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 ACOT1Q86TX2 421 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 YAF2Q8IY57 180 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 ZSCAN18Q8TBC5 510 aaPredicted RBP17.41■□□□□ 0.38
SF3A1-204ENST00000447376 ELSPBP1Q96BH3 223 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 ELMO3Q96BJ8 720 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 TRMT2BQ96GJ1 504 aaKnown RBP17.41■□□□□ 0.38
SF3A1-204ENST00000447376 SPATA17Q96L03 361 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 ASB16Q96NS5 453 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 LRRC3Q9BY71 257 aa17.41■□□□□ 0.38
SF3A1-204ENST00000447376 ZNF334Q9HCZ1 680 aaPredicted RBP17.41■□□□□ 0.38
SF3A1-204ENST00000447376 DOCK8Q8NF50 2099 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 CFHP08603 1231 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 TBXAS1P24557 533 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms