RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 RTN2O75298 545 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 BASP1P80723 227 aaKnown RBP11.84□□□□□ -0.51
PTCH2-203ENST00000447098 BNIP1Q12981 228 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 DNAJC3Q13217 504 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 SMAD1Q15797 465 aaKnown RBP11.84□□□□□ -0.51
PTCH2-203ENST00000447098 MAP7D3Q8IWC1 876 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 IRAK4Q9NWZ3 460 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 CTNNAL1Q9UBT7 734 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 SCINQ9Y6U3 715 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 A0A0G2JLL6 359 aaPredicted RBP11.84□□□□□ -0.51
PTCH2-203ENST00000447098 SMNDC1O75940 238 aaKnown RBP eCLIP11.84□□□□□ -0.51
PTCH2-203ENST00000447098 NME3Q13232 169 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 MTM1Q13496 603 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 BLMHQ13867 455 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 CAPSQ13938 189 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 HP1BP3Q5SSJ5 553 aaPredicted RBP11.84□□□□□ -0.51
PTCH2-203ENST00000447098 ENOSF1Q7L5Y1 443 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 PRRT2Q7Z6L0 340 aaPredicted RBP11.84□□□□□ -0.51
PTCH2-203ENST00000447098 FITM2Q8N6M3 262 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 MAIP1Q8WWC4 291 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 BSNDQ8WZ55 320 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 TIMM13Q9Y5L4 95 aaPredicted RBP11.84□□□□□ -0.51
PTCH2-203ENST00000447098 MAD1L1Q9Y6D9 718 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 USH1CQ9Y6N9 552 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 WDR91A4D1P6 747 aa11.83□□□□□ -0.51
PTCH2-203ENST00000447098 B3GAT3O94766 335 aa11.83□□□□□ -0.51
PTCH2-203ENST00000447098 GARTP22102 1010 aa11.83□□□□□ -0.51
PTCH2-203ENST00000447098 ARL1P40616 181 aaPredicted RBP11.83□□□□□ -0.51
PTCH2-203ENST00000447098 SPARCL1Q14515 664 aa11.83□□□□□ -0.51
PTCH2-203ENST00000447098 CCDC62Q6P9F0 684 aa11.83□□□□□ -0.51
PTCH2-203ENST00000447098 LNX1Q8TBB1 728 aaPredicted RBP11.83□□□□□ -0.51
PTCH2-203ENST00000447098 RNF217Q8TC41 542 aa11.83□□□□□ -0.51
PTCH2-203ENST00000447098 MCEEQ96PE7 176 aa11.83□□□□□ -0.51
PTCH2-203ENST00000447098 KCTD10Q9H3F6 313 aa11.83□□□□□ -0.51
PTCH2-203ENST00000447098 ZFP69BQ9UJL9 534 aa11.83□□□□□ -0.51
PTCH2-203ENST00000447098 PCDHB2Q9Y5E7 798 aa11.83□□□□□ -0.51
PTCH2-203ENST00000447098 EME2A4GXA9 379 aaPredicted RBP11.83□□□□□ -0.52
PTCH2-203ENST00000447098 AKR1A1P14550 325 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 NUMBP49757 651 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 SLC26A2P50443 739 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 MAP2K5Q13163 448 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 CUL2Q13617 745 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 RCN2Q14257 317 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 MFSD10Q14728 455 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 SYCP2LQ5T4T6 812 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 CCDC117Q8IWD4 279 aaPredicted RBP11.83□□□□□ -0.52
PTCH2-203ENST00000447098 ALG3Q92685 438 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 KRT35Q92764 455 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 C9orf72Q96LT7 481 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 ZSWIM1Q9BR11 485 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 WNT8AQ9H1J5 351 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 RNPEPQ9H4A4 650 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 ETAA1Q9NY74 926 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 CDH16O75309 829 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 STK10O94804 968 aaKnown RBP11.83□□□□□ -0.52
PTCH2-203ENST00000447098 MOCS2O96007 188 aaPredicted RBP11.83□□□□□ -0.52
PTCH2-203ENST00000447098 TNFSF9P41273 254 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 EEF1DP3Q658K8 133 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 ABHD15Q6UXT9 468 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 ACOT1Q86TX2 421 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 SNF8Q96H20 258 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 ZDHHC18Q9NUE0 388 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 GAS2O43903 313 aaKnown RBP11.83□□□□□ -0.52
PTCH2-203ENST00000447098 UNC5CO95185 931 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 RFX1P22670 979 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 CALB2P22676 271 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 OR1G1P47890 313 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 DRG2P55039 364 aaKnown RBP11.83□□□□□ -0.52
PTCH2-203ENST00000447098 MARSP56192 900 aaKnown RBP11.83□□□□□ -0.52
PTCH2-203ENST00000447098 CDR2Q01850 454 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 SMTNL2Q2TAL5 461 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 SLFN11Q7Z7L1 901 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 MAP4K3Q8IVH8 894 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 SIK2Q9H0K1 926 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 RNPEPL1Q9HAU8 725 aa11.83□□□□□ -0.52
PTCH2-203ENST00000447098 PRRC2BQ5JSZ5 2229 aaKnown RBP11.82□□□□□ -0.52
PTCH2-203ENST00000447098 NVLO15381 856 aaKnown RBP11.82□□□□□ -0.52
PTCH2-203ENST00000447098 LMNAP02545 664 aaKnown RBP11.82□□□□□ -0.52
PTCH2-203ENST00000447098 KRT3P12035 628 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 SDC4P31431 198 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 GRIK3Q13003 919 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 RWDD4Q6NW29 188 aaKnown RBP11.82□□□□□ -0.52
PTCH2-203ENST00000447098 DARS2Q6PI48 645 aaKnown RBP11.82□□□□□ -0.52
PTCH2-203ENST00000447098 FOXR2Q6PJQ5 311 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 SLC13A5Q86YT5 568 aaPredicted RBP11.82□□□□□ -0.52
PTCH2-203ENST00000447098 PRELID2Q8N945 189 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 RNF139Q8WU17 664 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 CKAP2Q8WWK9 683 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 MAGEB18Q96M61 343 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 ADAM33Q9BZ11 813 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 DPP3Q9NY33 737 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 TAS2R14Q9NYV8 317 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 DCTN4Q9UJW0 460 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 RPTORQ8N122 1335 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 FOXO6A8MYZ6 492 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 DDX3YO15523 660 aaKnown RBP11.82□□□□□ -0.52
PTCH2-203ENST00000447098 CREB3O43889 395 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 CALB1P05937 261 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 CPB1P15086 417 aa11.82□□□□□ -0.52
PTCH2-203ENST00000447098 CREB1P16220 341 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms