RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 FAM167AQ96KS9 214 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 CORO1BQ9BR76 489 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 TBC1D10AQ9BXI6 508 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 NIFKQ9BYG3 293 aaKnown RBP13.78□□□□□ -0.2
DDX56-206ENST00000446987 BHMT2Q9H2M3 363 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 CUEDC2Q9H467 287 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 STX18Q9P2W9 335 aaKnown RBP13.78□□□□□ -0.2
DDX56-206ENST00000446987 HSFX1Q9UBD0 423 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 PARP2Q9UGN5 583 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 TRIM33Q9UPN9 1127 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 ATP8A1Q9Y2Q0 1164 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 MYH10P35580 1976 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 RRN3P2A6NIE6 340 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 KLRC4O43908 158 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 TROVE2P10155 538 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX56-206ENST00000446987 RAG1P15918 1043 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 CYP11B2P19099 503 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 ANXA13P27216 316 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 CCL23P55773 120 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 OXCT1P55809 520 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 MGAT3Q09327 533 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 SPIDRQ14159 915 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 CCDC6Q16204 474 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 SLC18A3Q16572 532 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 XKR3Q5GH77 459 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 ZNF618Q5T7W0 954 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 DUPD1Q68J44 220 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 POTEGQ6S5H5 508 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 LRRC74BQ6ZQY2 392 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 ECHDC2Q86YB7 292 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 LRRC15Q8TF66 581 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 MAGEB18Q96M61 343 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 RUNDC3BQ96NL0 473 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 ZNF184Q99676 751 aaPredicted RBP13.77□□□□□ -0.21
DDX56-206ENST00000446987 TUBB6Q9BUF5 446 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 OXCT2Q9BYC2 517 aaPredicted RBP13.77□□□□□ -0.21
DDX56-206ENST00000446987 DENND2DQ9H6A0 471 aaPredicted RBP13.77□□□□□ -0.21
DDX56-206ENST00000446987 TIMMDC1Q9NPL8 285 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 SAR1AQ9NR31 198 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX56-206ENST00000446987 UTP6Q9NYH9 597 aaKnown RBP13.77□□□□□ -0.21
DDX56-206ENST00000446987 SEPT9Q9UHD8 586 aaPredicted RBP13.77□□□□□ -0.21
DDX56-206ENST00000446987 NOC2LQ9Y3T9 749 aaKnown RBP13.77□□□□□ -0.21
DDX56-206ENST00000446987 USH1CQ9Y6N9 552 aa13.77□□□□□ -0.21
DDX56-206ENST00000446987 A0A0J9YVX5 310 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 KRIT1O00522 736 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 KCNK3O14649 394 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 MAP3K7O43318 606 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 CSF2RAP15509 400 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 KLRC1P26715 233 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 PTPN4P29074 926 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 NPEPPSP55786 919 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 RAB15P59190 212 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 IFI35P80217 286 aaPredicted RBP13.76□□□□□ -0.21
DDX56-206ENST00000446987 GFPT1Q06210 699 aaPredicted RBP13.76□□□□□ -0.21
DDX56-206ENST00000446987 DHX34Q14147 1143 aaKnown RBP13.76□□□□□ -0.21
DDX56-206ENST00000446987 MAN2A1Q16706 1144 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 TCTN1Q2MV58 587 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 ZNF484Q5JVG2 852 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 C4orf50Q6ZRC1 276 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 C16orf59Q7L2K0 433 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 ZC3H18Q86VM9 953 aaKnown RBP13.76□□□□□ -0.21
DDX56-206ENST00000446987 ST13P4Q8IZP2 240 aaPredicted RBP13.76□□□□□ -0.21
DDX56-206ENST00000446987 ERMNQ8TAM6 284 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 NAT14Q8WUY8 206 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 SLC7A6OSQ96CW6 309 aaPredicted RBP13.76□□□□□ -0.21
DDX56-206ENST00000446987 TUBGCP5Q96RT8 1024 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 POLR3CQ9BUI4 534 aaPredicted RBP13.76□□□□□ -0.21
DDX56-206ENST00000446987 NOD1Q9Y239 953 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 STXBP5LQ9Y2K9 1186 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 STARD13Q9Y3M8 1113 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 PCDHA2Q9Y5H9 948 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 STK24Q9Y6E0 443 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 IGKV6-21A0A0C4DH24 114 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 MAPK13O15264 365 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 IQCF3P0C7M6 154 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 RPA1P27694 616 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 RPL26P61254 145 aaKnown RBP13.76□□□□□ -0.21
DDX56-206ENST00000446987 MGAT5Q09328 741 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 MTERF2Q49AM1 385 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 DTHD1Q6ZMT9 781 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 RRAGAQ7L523 313 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 VSIG1Q86XK7 387 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 TPH2Q8IWU9 490 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 PIP4K2CQ8TBX8 421 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 DNAJB3Q8WWF6 145 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 RNF25Q96BH1 459 aaPredicted RBP13.76□□□□□ -0.21
DDX56-206ENST00000446987 SERPINB12Q96P63 405 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 TUFT1Q9NNX1 390 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 CEP72Q9P209 647 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 SUCLA2Q9P2R7 463 aaPredicted RBP13.76□□□□□ -0.21
DDX56-206ENST00000446987 DNAJB4Q9UDY4 337 aa13.76□□□□□ -0.21
DDX56-206ENST00000446987 MICAL3Q7RTP6 2002 aa13.75□□□□□ -0.21
DDX56-206ENST00000446987 SMIM35A0A1B0GVV1 85 aa13.75□□□□□ -0.21
DDX56-206ENST00000446987 RASGRF2O14827 1237 aa13.75□□□□□ -0.21
DDX56-206ENST00000446987 MAGEB2O15479 319 aa13.75□□□□□ -0.21
DDX56-206ENST00000446987 NBNO60934 754 aa13.75□□□□□ -0.21
DDX56-206ENST00000446987 CYP1A1P04798 512 aaPredicted RBP13.75□□□□□ -0.21
DDX56-206ENST00000446987 HARSP12081 509 aaKnown RBP13.75□□□□□ -0.21
DDX56-206ENST00000446987 VAV1P15498 845 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms