RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	MTMR12	Q9C0I1	747 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	MAD1L1	Q9Y6D9	718 aa		13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	MYO18A	Q92614	2054 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-238	ENST00000446312	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.15	□□□□□ -0.3
DDR1-238	ENST00000446312		E5RJQ4	531 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312		H0YIN7	160 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	SORBS2	O94875	1100 aa	Known RBP	13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	GGPS1	O95749	300 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	EGFR	P00533	1210 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	UNG	P13051	313 aa	Predicted RBP	13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	AMPD1	P23109	780 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	RASSF2	P50749	326 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	GPX6	P59796	221 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	HIF1A	Q16665	826 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	SLC27A3	Q5K4L6	730 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	GPAT2	Q6NUI2	795 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	ASRGL1	Q7L266	308 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	JOSD2	Q8TAC2	188 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	DNAJC9	Q8WXX5	260 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	ATG4C	Q96DT6	458 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	AGO2	Q9UKV8	859 aa	Known RBP	13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	CCDC78	A2IDD5	438 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	PIK3CD	O00329	1044 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	ZMPSTE24	O75844	475 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	MYL2	P10916	166 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	NPR1	P16066	1061 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	CALB2	P22676	271 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	PSMA2	P25787	234 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	HOXA10	P31260	410 aa	Predicted RBP	13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	NT5C2	P49902	561 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	EPHB1	P54762	984 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	GTF2B	Q00403	316 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	FAAP100	Q0VG06	881 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	STAT4	Q14765	748 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	SLC15A2	Q16348	729 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	WDR72	Q3MJ13	1102 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	SPNS2	Q8IVW8	549 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	GALNT15	Q8N3T1	639 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	LARGE2	Q8N3Y3	721 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	OGFOD1	Q8N543	542 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	MOCOS	Q96EN8	888 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	CADM1	Q9BY67	442 aa	Known RBP	13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	CEP41	Q9BYV8	373 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	MAGEB5	Q9BZ81	275 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	TMX2	Q9Y320	296 aa		13.15	□□□□□ -0.3
DDR1-238	ENST00000446312	LIAS	O43766	372 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	HAUS5	O94927	633 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	MT-ND3	P03897	115 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	ESRRA	P11474	423 aa	Predicted RBP	13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	DES	P17661	470 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	MYL6	P60660	151 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	CRADD	P78560	199 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	FYB2	Q5VWT5	728 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	LRRC71	Q8N4P6	559 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	STK32A	Q8WU08	396 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	ZNF606	Q8WXB4	792 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	HAPLN2	Q9GZV7	340 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	NMRK1	Q9NWW6	199 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	ZNF70	Q9UC06	446 aa	Predicted RBP	13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	POLI	Q9UNA4	740 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	PCDHB2	Q9Y5E7	798 aa		13.15	□□□□□ -0.31
DDR1-238	ENST00000446312	LPXN	O60711	386 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	EDF1	O60869	148 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	EDN1	P05305	212 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	RFC1	P35251	1148 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	CAP2	P40123	477 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	ABCG1	P45844	678 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	NEK3	P51956	506 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	ARFIP2	P53365	341 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	PPP2R5D	Q14738	602 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	SNX30	Q5VWJ9	437 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	RSPH3	Q86UC2	560 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	THTPA	Q9BU02	230 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	TMEM120A	Q9BXJ8	343 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	UBE2O	Q9C0C9	1292 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	GALNT8	Q9NY28	637 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	ARHGAP42	A6NI28	874 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	TXNDC9	O14530	226 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	VNN1	O95497	513 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	BLMH	Q13867	455 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312		Q3C1V9	767 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	ACSBG2	Q5FVE4	666 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	C16orf46	Q6P387	395 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	PRPF39	Q86UA1	669 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	GBP7	Q8N8V2	638 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	UBA3	Q8TBC4	463 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	FEZF2	Q8TBJ5	459 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	STMN2	Q93045	179 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	XPO7	Q9UIA9	1087 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	EXOC7	Q9UPT5	735 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	GINS2	Q9Y248	185 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	AK5	Q9Y6K8	562 aa		13.14	□□□□□ -0.31
DDR1-238	ENST00000446312	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.13	□□□□□ -0.31
DDR1-238	ENST00000446312	LOC100653049	A0A140TA62	436 aa		13.13	□□□□□ -0.31

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