RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 PIPSLA2A3N6 862 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 TMEM233B4DJY2 109 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 NPIPB8E9PQR5 432 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 VPS4BO75351 444 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 SOAT2O75908 522 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 ZNF202O95125 648 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 BRAFP15056 766 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 CHRM3P20309 590 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 TACR2P21452 398 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 ZEB1P37275 1124 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 GCLCP48506 637 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 RENBPP51606 427 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 CASP5P51878 434 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 HTRA4P83105 476 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 MXRA7P84157 204 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 IFIT5Q13325 482 aaKnown RBP5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 LMBRD2Q68DH5 695 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 MICALCLQ6ZW33 695 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 GAS2L3Q86XJ1 694 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 DNAJC5GQ8N7S2 189 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 OR56A3Q8NH54 315 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 DEPTORQ8TB45 409 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 PROKR1Q8TCW9 393 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 SLC46A1Q96NT5 459 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 TBCBQ99426 244 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 SERHL2Q9H4I8 314 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 ZNF287Q9HBT7 754 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 ANKFY1Q9P2R3 1169 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 TMX2Q9Y320 296 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 DGKBQ9Y6T7 804 aa5.33□□□□□ -1.56
HMGB1P48-201ENST00000446155 COL4A3Q01955 1670 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 MBD3L4A6NDZ8 208 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 MBD3L3A6NE82 208 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 RASA4BC9J798 803 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 F8W8V4 182 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 FOXN3O00409 490 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 RASA4O43374 803 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 TBC1D4O60343 1298 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 IL1R1P14778 569 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 GATA3P23771 443 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 RPS16P62249 146 aaKnown RBP5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 BTKQ06187 659 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 ZNF543Q08ER8 600 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 RAB32Q13637 225 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 TRIM14Q14142 442 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 CD300EQ496F6 205 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 AMOTQ4VCS5 1084 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 C3orf38Q5JPI3 329 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 LY6G5CQ5SRR4 150 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 KCNV1Q6PIU1 500 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 SLC30A10Q6XR72 485 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 COLGALT2Q8IYK4 626 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 LNX2Q8N448 690 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 SLC15A4Q8N697 577 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 TMEM125Q96AQ2 219 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 ZC3H10Q96K80 434 aaKnown RBP5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 OSBPL9Q96SU4 736 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 CRB3Q9BUF7 120 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 ZNF341Q9BYN7 854 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 UNKQ9C0B0 810 aaKnown RBP5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 INTS13Q9NVM9 706 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 SYBUQ9NX95 663 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 OGDHLQ9ULD0 1010 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 RAD54BQ9Y620 910 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 RPS6KL1Q9Y6S9 549 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 SCINQ9Y6U3 715 aa5.32□□□□□ -1.56
HMGB1P48-201ENST00000446155 GRID2IPA4D2P6 1211 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 TOR1BO14657 336 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 PROM1O43490 865 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 ATXN1LP0C7T5 689 aaKnown RBP5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 SRGNP10124 158 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 CYP2C9P11712 490 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 MAKP20794 623 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 NPTX2P47972 431 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 PRIM2P49643 509 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 NDUFV1P49821 464 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 LOXL3P58215 753 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 IQCB1Q15051 598 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 ELF2Q15723 593 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 TUBB8Q3ZCM7 444 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 ABHD17BQ5VST6 288 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 DCAF12L1Q5VU92 463 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 RNF152Q8N8N0 203 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 SNX19Q92543 992 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 LARP4BQ92615 738 aaKnown RBP5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 WDR11Q9BZH6 1224 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 A1CFQ9NQ94 594 aaKnown RBP5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 SACM1LQ9NTJ5 587 aa5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 C9orf78Q9NZ63 289 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 REXO2Q9Y3B8 237 aaKnown RBP5.31□□□□□ -1.56
HMGB1P48-201ENST00000446155 TRGV11A0A075B6L2 103 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 C6P13671 934 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 TSHRP16473 764 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 KRT4P19013 534 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 TGM1P22735 817 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 KLRC1P26715 233 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 CCT5P48643 541 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 FPGSQ05932 587 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 DAG1Q14118 895 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms