RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 ANK1P16157 1881 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 FNDC1Q4ZHG4 1894 aaPredicted RBP18.47■□□□□ 0.55
SGCE-206ENST00000445866 O00370 1275 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 ADH1AP07327 375 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 TNFAIP3P21580 790 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 BDNFP23560 247 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 CDR2Q01850 454 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 MEA1Q16626 185 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 ARHGAP17Q68EM7 881 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 LCLAT1Q6UWP7 414 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 PAQR9Q6ZVX9 377 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 ZNF571Q7Z3V5 609 aaPredicted RBP18.47■□□□□ 0.55
SGCE-206ENST00000445866 FUKQ8N0W3 1084 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 UBA3Q8TBC4 463 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 MRPL38Q96DV4 380 aaKnown RBP18.47■□□□□ 0.55
SGCE-206ENST00000445866 LRCH3Q96II8 777 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 CHP1Q99653 195 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.47■□□□□ 0.55
SGCE-206ENST00000445866 TTYH1Q9H313 450 aaPredicted RBP18.47■□□□□ 0.55
SGCE-206ENST00000445866 PRDM12Q9H4Q4 367 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 SEPT11Q9NVA2 429 aaKnown RBP18.47■□□□□ 0.55
SGCE-206ENST00000445866 ABI2Q9NYB9 513 aaPredicted RBP18.47■□□□□ 0.55
SGCE-206ENST00000445866 HESX1Q9UBX0 185 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 NOCTQ9UK39 431 aaKnown RBP18.47■□□□□ 0.55
SGCE-206ENST00000445866 TMEM265A0A087WTH1 108 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 WDR27A2RRH5 827 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 MMEP08473 750 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 CFHP08603 1231 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 CHRNB2P17787 502 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 EIF4A3P38919 411 aaKnown RBP18.46■□□□□ 0.55
SGCE-206ENST00000445866 ADCY1Q08828 1119 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 GRIN2CQ14957 1233 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 GOLGA7BQ2TAP0 167 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 TPGS2Q68CL5 300 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 RBM23Q86U06 439 aaKnown RBP18.46■□□□□ 0.55
SGCE-206ENST00000445866 ANKRD52Q8NB46 1076 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 PPP1R9BQ96SB3 815 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 ZNF518BQ9C0D4 1074 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 ARHGAP20Q9P2F6 1191 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 AFF4Q9UHB7 1163 aaKnown RBP18.46■□□□□ 0.55
SGCE-206ENST00000445866 TSPAN16Q9UKR8 245 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 SLC27A5Q9Y2P5 690 aa18.46■□□□□ 0.55
SGCE-206ENST00000445866 TRIP11Q15643 1979 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 SCN1AP35498 2009 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 PER2O15055 1255 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 MICAL2O94851 1124 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 ABLIM3O94929 683 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 PLEKP08567 350 aaPredicted RBP18.45■□□□□ 0.54
SGCE-206ENST00000445866 SPATA31D3P0C874 917 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 CYP2F1P24903 491 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 ELF1P32519 619 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 CDK17Q00537 523 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 DUSP4Q13115 394 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 CYP26C1Q6V0L0 522 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 SPATA31D4Q6ZUB0 917 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 CCDC42Q96M95 316 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 BAG1Q99933 345 aaPredicted RBP18.45■□□□□ 0.54
SGCE-206ENST00000445866 RHOBTB2Q9BYZ6 727 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 TLE6Q9H808 572 aa18.45■□□□□ 0.54
SGCE-206ENST00000445866 NHEJ1Q9H9Q4 299 aaPredicted RBP18.45■□□□□ 0.54
SGCE-206ENST00000445866 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.45■□□□□ 0.54
SGCE-206ENST00000445866 AP1G2O75843 785 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 SLC8A3P57103 927 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 ZNF697Q5TEC3 545 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 DENND1BQ6P3S1 775 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 VPS36Q86VN1 386 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 TMTC1Q8IUR5 882 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 PASD1Q8IV76 773 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 LRRC8AQ8IWT6 810 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 SPPL2BQ8TCT7 592 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 C2orf15Q8WU43 125 aaKnown RBP18.44■□□□□ 0.54
SGCE-206ENST00000445866 FUBP3Q96I24 572 aaKnown RBP eCLIP18.44■□□□□ 0.54
SGCE-206ENST00000445866 FAM161BQ96MY7 647 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 DUSP16Q9BY84 665 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 DEF6Q9H4E7 631 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 ADAMTS1Q9UHI8 967 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 PCDHGC3Q9UN70 934 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 ATP8B3O60423 1300 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 PTPRSQ13332 1948 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 CHD7Q9P2D1 2997 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 MTMR11A4FU01 709 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 M0QYV0 167 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 TGM5O43548 720 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 FAM200BP0CF97 657 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 ATF2P15336 505 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 GRIK1P39086 918 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 FMO1Q01740 532 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 CFAP221Q4G0U5 840 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 LILRA6Q6PI73 481 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 FAM35AQ86V20 835 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 PCDHB18PQ96TA0 734 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 CYP4F11Q9HBI6 524 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 ABCB6Q9NP58 842 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 CEP83Q9Y592 693 aa18.44■□□□□ 0.54
SGCE-206ENST00000445866 CLASP2O75122 1294 aaKnown RBP18.43■□□□□ 0.54
SGCE-206ENST00000445866 VNN2O95498 520 aa18.43■□□□□ 0.54
SGCE-206ENST00000445866 TUFMP49411 452 aaKnown RBP18.43■□□□□ 0.54
SGCE-206ENST00000445866 MAP3K7CLP57077 242 aa18.43■□□□□ 0.54
SGCE-206ENST00000445866 MGAT5BQ3V5L5 792 aa18.43■□□□□ 0.54
SGCE-206ENST00000445866 TTC30AQ86WT1 665 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms