RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 TNFSF4P23510 183 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 HTR3AP46098 478 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 PXNP49023 591 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 TUBB3Q13509 450 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 SF3B3Q15393 1217 aaKnown RBP5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 PREPLQ4J6C6 727 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 PLA1AQ53H76 456 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 FAM209BQ5JX69 171 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 LY6G5CQ5SRR4 150 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 Q6ZPA2 131 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 TSHZ1Q6ZSZ6 1077 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 MORC1Q86VD1 984 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 OR2C3Q8N628 320 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 SSH3Q8TE77 659 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 LPIN2Q92539 896 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 PTCD3Q96EY7 689 aaKnown RBP5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 TNIP3Q96KP6 325 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 CCDC138Q96M89 665 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 PTDSS2Q9BVG9 487 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 COLEC11Q9BWP8 271 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 AS3MTQ9HBK9 375 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 STARD7Q9NQZ5 370 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 MID2Q9UJV3 735 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 NDRG4Q9ULP0 352 aaKnown RBP5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 SHOC2Q9UQ13 582 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 SSX2IPQ9Y2D8 614 aa5.51□□□□□ -1.53
HMGB3P6-201ENST00000444896 FER1L4A9Z1Z3 1794 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 TRIAP1O43715 76 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 ANXA2P07355 339 aaKnown RBP5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 ITGAMP11215 1152 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 LRPAP1P30533 357 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 CARSP49589 748 aaKnown RBP5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 DGKEP52429 567 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 SP2Q02086 613 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 MYO1EQ12965 1108 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 NPY5RQ15761 445 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 ABHD17BQ5VST6 288 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 HIBCHQ6NVY1 386 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 LAYNQ6UX15 382 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 TOGARAM2Q6ZUX3 1019 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 SKAP1Q86WV1 359 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 FAM186BQ8IYM0 893 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 SAMD3Q8N6K7 520 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 ZC3H10Q96K80 434 aaKnown RBP5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 Q96MF0 132 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 NLRC4Q9NPP4 1024 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 SERHLQ9NQF3 203 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 SYBUQ9NX95 663 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 ITGB1BP2Q9UKP3 347 aa5.5□□□□□ -1.53
HMGB3P6-201ENST00000444896 DCAF1Q9Y4B6 1507 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 A0A1W2PPC4 97 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 APOL1O14791 398 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 PROM1O43490 865 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 RASSF9O75901 435 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 CSF1RP07333 972 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 FGFR2P21802 821 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 KCNA3P22001 575 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 CD6P30203 668 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 PTPAQ15257 358 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 MGAT5BQ3V5L5 792 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 ARHGAP40Q5TG30 622 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 FCRL6Q6DN72 434 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 XRRA1Q6P2D8 792 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 VWA1Q6PCB0 445 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 ZNF627Q7L945 461 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 KCTD20Q7Z5Y7 419 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 VRK3Q8IV63 474 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 SLC16A11Q8NCK7 471 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 NEU4Q8WWR8 484 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 BRI3BPQ8WY22 251 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 LARP4BQ92615 738 aaKnown RBP5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 PMM1Q92871 262 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 NELL2Q99435 816 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 MPHOSPH6Q99547 160 aaKnown RBP5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 CXorf36Q9H7Y0 433 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 TBCCD1Q9NVR7 557 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 DNMT3BQ9UBC3 853 aaKnown RBP5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 MYO1AQ9UBC5 1043 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 PADI4Q9UM07 663 aa5.49□□□□□ -1.53
HMGB3P6-201ENST00000444896 A0A087WZ62 844 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 H7C4K7 107 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 PEX14O75381 377 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 FGF18O76093 207 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 A1BGP04217 495 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 ERBB2P04626 1255 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 KRT4P19013 534 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 ARHGEF7Q14155 803 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 SLC29A2Q14542 456 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 PTCHD3Q3KNS1 767 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 IZUMO3Q5VZ72 239 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 ICE2Q659A1 982 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 SFRP4Q6FHJ7 346 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 RGS7BPQ6MZT1 257 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 ULK2Q8IYT8 1036 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 CCDC33Q8N5R6 958 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 VGLL2Q8N8G2 317 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 DEPTORQ8TB45 409 aa5.48□□□□□ -1.53
HMGB3P6-201ENST00000444896 MYCBPAPQ8TBZ2 947 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms