RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 MTMR3Q13615 1198 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 MAN2A1Q16706 1144 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 KLHL40Q2TBA0 621 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 MDH1BQ5I0G3 518 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 ENOSF1Q7L5Y1 443 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 RNF135Q8IUD6 432 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 SCN4BQ8IWT1 228 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 UBALD2Q8IYN6 164 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 ENOX1Q8TC92 643 aaKnown RBP13.04□□□□□ -0.32
LTBR-204ENST00000444814 MYLPFQ96A32 169 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 SMARCD1Q96GM5 515 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 SCN1AP35498 2009 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
LTBR-204ENST00000444814 MTCL1Q9Y4B5 1905 aaKnown RBP13.03□□□□□ -0.32
LTBR-204ENST00000444814 MYBPHLA2RUH7 354 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 LAMP2P13473 410 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 SP100P23497 879 aaPredicted RBP13.03□□□□□ -0.32
LTBR-204ENST00000444814 LMO2P25791 158 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 DDX6P26196 483 aaKnown RBP eCLIP13.03□□□□□ -0.32
LTBR-204ENST00000444814 EEF1GP26641 437 aaKnown RBP13.03□□□□□ -0.32
LTBR-204ENST00000444814 ASPAP45381 313 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 PPP3CCP48454 512 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 EPHA5P54756 1037 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 TPM4P67936 248 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 CBWD6Q4V339 395 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 CBWD3Q5JTY5 395 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 CBWD5Q5RIA9 395 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 CAVIN1Q6NZI2 390 aaKnown RBP13.03□□□□□ -0.32
LTBR-204ENST00000444814 DNAJB7Q7Z6W7 309 aaPredicted RBP13.03□□□□□ -0.32
LTBR-204ENST00000444814 LRRTM3Q86VH5 581 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 CRYBG2Q8N1P7 616 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 JAKMIP2Q96AA8 810 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 SPATA17Q96L03 361 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 NECAB3Q96P71 396 aaPredicted RBP13.03□□□□□ -0.32
LTBR-204ENST00000444814 C1QTNF1Q9BXJ1 281 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 SLITRK6Q9H5Y7 841 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 SORCS3Q9UPU3 1222 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 GTPBP10A4D1E9 387 aaKnown RBP13.03□□□□□ -0.32
LTBR-204ENST00000444814 SMTNL1A8MU46 457 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 PES1O00541 588 aaKnown RBP13.03□□□□□ -0.32
LTBR-204ENST00000444814 CAVIN2O95810 425 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 CD58P19256 250 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 NDST1P52848 882 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 CDH8P55286 799 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 CUL2Q13617 745 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 SPOPLQ6IQ16 392 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 GBP6Q6ZN66 633 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 MRPS31Q92665 395 aaKnown RBP13.03□□□□□ -0.32
LTBR-204ENST00000444814 FGF13Q92913 245 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 PCED1BQ96HM7 432 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 C8orf48Q96LL4 319 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 PKMYT1Q99640 499 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 ATXN3LQ9H3M9 355 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 DMAP1Q9NPF5 467 aaPredicted RBP13.03□□□□□ -0.32
LTBR-204ENST00000444814 COMMD8Q9NX08 183 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 CEP72Q9P209 647 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 KIAA1257Q9ULG3 409 aa13.03□□□□□ -0.32
LTBR-204ENST00000444814 CILPO75339 1184 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 RTN3O95197 1032 aaPredicted RBP13.02□□□□□ -0.33
LTBR-204ENST00000444814 FAM200BP0CF97 657 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 BDNFP23560 247 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 CYP2F1P24903 491 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 RAP1GAPP47736 663 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 MYL5Q02045 173 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 TDGQ13569 410 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 PTPN21Q16825 1174 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 ACOT1Q86TX2 421 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 PPM1KQ8N3J5 372 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 EHBP1Q8NDI1 1231 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 PDZD8Q8NEN9 1154 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 TRMT2BQ96GJ1 504 aaKnown RBP13.02□□□□□ -0.33
LTBR-204ENST00000444814 CRTAC1Q9NQ79 661 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 HCFC1R1Q9NWW0 138 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 LIMD1Q9UGP4 676 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 NFE2L3Q9Y4A8 694 aa13.02□□□□□ -0.33
LTBR-204ENST00000444814 TSC2P49815 1807 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 KCNJ18B7U540 433 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 DPYSL4O14531 572 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 ATP2C2O75185 946 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 PFKLP17858 780 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 GABRR2P28476 465 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 MFAP3P55082 362 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 GCNT1Q02742 428 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 KCNJ12Q14500 433 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 STILQ15468 1287 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 EXOC3L4Q17RC7 722 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 FKBP15Q5T1M5 1219 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 DENND5BQ6ZUT9 1274 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 NPAS3Q8IXF0 933 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 GIPC2Q8TF65 315 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 SEMA4DQ92854 862 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 TMEM176AQ96HP8 235 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 HEXIM2Q96MH2 286 aaKnown RBP13.01□□□□□ -0.33
LTBR-204ENST00000444814 SLITRK1Q96PX8 696 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 TUBGCP2Q9BSJ2 902 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 APOBEC3GQ9HC16 384 aaKnown RBP13.01□□□□□ -0.33
LTBR-204ENST00000444814 ZFP14Q9HCL3 533 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 CISHQ9NSE2 258 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 TMLHEQ9NVH6 421 aa13.01□□□□□ -0.33
LTBR-204ENST00000444814 GCNT4Q9P109 453 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms